Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  118 bits (296), Expect = 7e-31
 Identities = 74/283 (26%), Positives = 143/283 (50%), Gaps = 8/283 (2%)

Query: 433 LNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSA 492
           L   + ++ D   G +  A Q ++ +   A+    Q ++  +S+  +       ++V   
Sbjct: 239 LQTALTRLVDAGVGVKSRAAQSSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQVTHN 298

Query: 493 AEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLI 552
            + T  ++ +  + ++ G E    ++  M S+++ ++++G+++  L E  + I  V  +I
Sbjct: 299 VQSTAHAASDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQTQSIGSVVDVI 358

Query: 553 KDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRI 612
             IAEQT LLALNA+IEAARAG+ G+GFAVVA E++SLA+  + S E+I+H I  +    
Sbjct: 359 TSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIHHIIASLRAGA 418

Query: 613 DDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGAL 672
           +  +    +G+      V +++ V  AL  I  +V+    +I G+      ASE      
Sbjct: 419 ERAVSTASRGEQISRDSVHSVEAVQAALSGIAVAVS----RITGMSQQMATASEQQSHVA 474

Query: 673 KNAQE----IAALSEEFTATAEEVTASTEELNSIIEEIRGIAE 711
           ++  +    IA L ++    A +    +++L  + E +  +AE
Sbjct: 475 EDINQQIVRIAQLCDQSAGQARQGAEISQDLERMAEYLHSLAE 517



 Score = 40.8 bits (94), Expect = 2e-07
 Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 14/141 (9%)

Query: 593 EIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVN---E 649
           ++  +++ + H ++       D   L  +G +   K +  +  ++DA+  I ++VN   E
Sbjct: 287 QMAATIQQVTHNVQSTAHAASDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAE 346

Query: 650 SAVKINGIKHGAQNASENTEGALKNAQEIAALSEE----FTATAEEV-------TASTEE 698
               I  +     + +E T     NA   AA + E    F   A+EV        ASTEE
Sbjct: 347 QTQSIGSVVDVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEE 406

Query: 699 LNSIIEEIRGIAEEVTQVAER 719
           ++ II  +R  AE     A R
Sbjct: 407 IHHIIASLRAGAERAVSTASR 427