Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 712 a.a., Methyl-accepting chemotaxis protein McpU from Pseudomonas lactucae CFBP13502

 Score =  125 bits (314), Expect = 7e-33
 Identities = 88/349 (25%), Positives = 164/349 (46%), Gaps = 42/349 (12%)

Query: 380 LTNVSDVMNRVAKGD--FTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQI 437
           + +V+ ++  +A GD   T R D  +++             + +L++     ++ L   I
Sbjct: 387 INSVAQMLKAIASGDGDLTQRLDYRKKDE------------LGELVQWFNRFLDKLQPTI 434

Query: 438 QKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETV 497
            +++  +  A  TA Q +E A Q +E    Q  ++ + +         A EV S+A    
Sbjct: 435 AQIKQSITDARGTADQSSEIARQTSEGMQVQFREIDQLATASNEMSATAHEVASSASNAA 494

Query: 498 KSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAE 557
           +++    + S+ G+  +E +   + ++ + + +    ++ L  + ++I  V  +I+ IAE
Sbjct: 495 QAARGADQASQEGISIIERSTKDINALADEVSKAVAEVEALAVNSEQIGSVLEVIRSIAE 554

Query: 558 QTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTID 617
           QT LLALNA+IEAARAG++G+GFAVVA E+++LA+  + SVE+I   IE +       + 
Sbjct: 555 QTNLLALNAAIEAARAGESGRGFAVVADEVRNLAKRTQDSVEEIRQVIERIQTGTRGVVA 614

Query: 618 LGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQE 677
           +    + +       I     AL KI ++V                              
Sbjct: 615 VMHSSQAQAQSNARQIHHAVQALGKISQAVTV---------------------------- 646

Query: 678 IAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERVTKKSSQ 726
           I+ ++ +  + AEE +A  EE+N  +  IRG+ E +T+ A    + SSQ
Sbjct: 647 ISDMNLQIASAAEEQSAVAEEVNRNVSTIRGVTETLTEQAAESAQVSSQ 695



 Score = 49.3 bits (116), Expect = 7e-10
 Identities = 64/329 (19%), Positives = 128/329 (38%), Gaps = 38/329 (11%)

Query: 402 SRENNNLEKAINTAVSNVADLIKEL--REEVELLNIQIQKVEDELKGAEETATQVAEAAT 459
           +R  N++ + +    S   DL + L  R++ EL  + +Q     L   + T  Q+ ++ T
Sbjct: 384 TRPINSVAQMLKAIASGDGDLTQRLDYRKKDELGEL-VQWFNRFLDKLQPTIAQIKQSIT 442

Query: 460 QVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAIS 519
                A   S   +++SE ++  +    ++ +A+ E   ++ E+  ++    +    A  
Sbjct: 443 DARGTADQSSEIARQTSEGMQVQFREIDQLATASNEMSATAHEVASSASNAAQAARGADQ 502

Query: 520 RMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKG 579
             Q   ++I+   K I  L ++         + K +AE   L                  
Sbjct: 503 ASQEGISIIERSTKDINALADE---------VSKAVAEVEAL------------------ 535

Query: 580 FAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDA 639
            AV + +I S+ E I+   E  N         ++  I+    G+      V+A DEV + 
Sbjct: 536 -AVNSEQIGSVLEVIRSIAEQTNLLA------LNAAIEAARAGESGRGFAVVA-DEVRNL 587

Query: 640 LLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEEL 699
             + ++SV E    I  I+ G +        +   AQ  A           +++ +   +
Sbjct: 588 AKRTQDSVEEIRQVIERIQTGTRGVVAVMHSSQAQAQSNARQIHHAVQALGKISQAVTVI 647

Query: 700 NSIIEEIRGIAEEVTQVAERVTKKSSQFK 728
           + +  +I   AEE + VAE V +  S  +
Sbjct: 648 SDMNLQIASAAEEQSAVAEEVNRNVSTIR 676