Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 732 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

 Score =  951 bits (2457), Expect = 0.0
 Identities = 506/729 (69%), Positives = 595/729 (81%), Gaps = 2/729 (0%)

Query: 3   ISFKKIGTKLLIFMILCAIIPLMVVGGVSTNKITEEMQIQGDNSVNDNLNIFQESIENVI 62
           I+ KK+GTK+LIF I+  ++P++V G V+ + I   +      S+N ++ I  + IE+  
Sbjct: 4   INTKKLGTKMLIFSIISVLVPILVFGFVANDTIAGILDDNAQKSINTDIKIADQIIESRF 63

Query: 63  VEFETTTSYTASLDTFSELLVNDDKEVLYDFAEKMKKSSEVDLVAFTDKNGNIISSSDNV 122
           +EFE+   Y  +       + N D E L    E  + +   D V   D NGN I+S+   
Sbjct: 64  IEFESICEYATNKADVITSVSNKDSEKLSIGVETFRAAINSDFVGVLDSNGNTIASTAGP 123

Query: 123 QTNLKPVISKLLSNEVQSSFEIISGSEASKYS-DYKVNNINDALAICVVAPVYHSGELVG 181
              +  V  KL+++  + SFE IS + A K + +YKV N++ AL + V  P+Y +G +VG
Sbjct: 124 DIQIGSVAQKLITSGTKRSFEPISANTAYKINKNYKVENVDSALGMVVTYPIYENGNVVG 183

Query: 182 TVTLVDIVNNDDYWVDSLKERTGNEATIFLKNVRISTTVQTNGQDATGTKCSDEVYN-II 240
           ++ ++DI+NN++  VD +K  TG+EAT  L   RIST++  NG+   GT  SDEV+  ++
Sbjct: 184 SIIIIDILNNNNEIVDQVKADTGDEATFSLGKQRISTSLIENGKRPVGTSISDEVWTYVM 243

Query: 241 TNHQDYVGTANVLGSEYITKYSPIEDKDGNVVGIIFTGIPKAPFVAVITDTRNEIIIISL 300
           + +  Y GTANVLG+E IT Y+P+ D + +V+G++F G P+   +A   D RN+II+++L
Sbjct: 244 SQNAVYKGTANVLGTELITAYAPLLDANDDVIGMVFVGAPQTDAIAAKNDARNKIIMLAL 303

Query: 301 LGLLLSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAE 360
            G+L++ LI  Y+ RKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAE
Sbjct: 304 FGILIAFLITSYSNRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAE 363

Query: 361 NVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVA 420
           NVKNLMKTMDMDK+ELA LL NVSDVMNRVAKGDFTARADESRENN LEKAINTAVSNVA
Sbjct: 364 NVKNLMKTMDMDKLELANLLNNVSDVMNRVAKGDFTARADESRENNKLEKAINTAVSNVA 423

Query: 421 DLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELE 480
           DLIKELREE++LLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELE
Sbjct: 424 DLIKELREELDLLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELE 483

Query: 481 NTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGE 540
           +TYE AKEVYSAAEETVKSSEEIKENSE GVEKVENAISRMQSITNVIDELGKSIKMLGE
Sbjct: 484 STYENAKEVYSAAEETVKSSEEIKENSEIGVEKVENAISRMQSITNVIDELGKSIKMLGE 543

Query: 541 DGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVED 600
           DGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIK+LAEEIKKSVED
Sbjct: 544 DGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKALAEEIKKSVED 603

Query: 601 INHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHG 660
           INHTI+GVN RI+DT+DLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESA+KINGIKHG
Sbjct: 604 INHTIDGVNSRIEDTVDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAIKINGIKHG 663

Query: 661 AQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERV 720
           AQNASENTEGALKNAQ+IAALSEEFTATAEEVTASTEELNSIIEEIR IAEE+T V+ERV
Sbjct: 664 AQNASENTEGALKNAQDIAALSEEFTATAEEVTASTEELNSIIEEIRVIAEELTHVSERV 723

Query: 721 TKKSSQFKI 729
           ++KS+QF+I
Sbjct: 724 SEKSNQFEI 732