Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 698 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  131 bits (329), Expect = 1e-34
 Identities = 119/433 (27%), Positives = 190/433 (43%), Gaps = 66/433 (15%)

Query: 301 LGLLLSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTT-VKTGDELQELSDSFNKMA 359
           L L L   IA    R IT P+  +K   E+   GN   +   V  GDEL +++ +     
Sbjct: 196 LALALGAAIAFVIARSITGPVNGIKGCMEQLTAGNLSAEVPGVDRGDELGQMAKAVGVFK 255

Query: 360 ENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNV 419
           E    L++  +M+  + A                   ARA+  R+   + +  NT   +V
Sbjct: 256 EG---LLRVKEMEAEQEAQ-----------------KARAEAERKAA-MRQLANTFEGSV 294

Query: 420 ADLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEEL 479
             +I+ +                        ATQ+  ++TQ+A  A++ SA+    +   
Sbjct: 295 GKVIQTVTS---------------------AATQLQVSSTQMASTAAETSAQATTVASAS 333

Query: 480 ENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQ---SITNVIDELGKSIK 536
           +      + V +A EE   S  EI +     VE+ ++  SR Q   + TNV       I+
Sbjct: 334 QQASANVETVAAATEELSSSITEIAKQ----VERSQSVASRAQDEAANTNV------QIR 383

Query: 537 MLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKK 596
            L E+  KI E+  LI DIA QT LLALNA+IEAARAGDAGKGFAVVA+E+K LA +  K
Sbjct: 384 ALSENANKIGEIVNLINDIASQTNLLALNATIEAARAGDAGKGFAVVANEVKHLATQTGK 443

Query: 597 SVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKING 656
           + E+I   I  V    ++ +         +D     I E+ +    +  +V E A     
Sbjct: 444 ATEEIASQIRAVQDGTNNAV-------HAIDGITKVISEMGEISASVASAVEEQAAATQE 496

Query: 657 IKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQV 716
           I    + A+  T     +   +   + +  A AE++ ++  +L+   E +R    EV + 
Sbjct: 497 IARNVEQAAAGTAEVSSSVVTVEQAARDTGAAAEQIHSAATDLSQQSEFLRA---EVGRF 553

Query: 717 AERVTKKSSQFKI 729
            ++V    S  K+
Sbjct: 554 LDQVRSDQSDVKL 566