Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 570 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  167 bits (422), Expect = 2e-45
 Identities = 140/545 (25%), Positives = 241/545 (44%), Gaps = 76/545 (13%)

Query: 188 IVNNDDYWVDSLKERTGNEATIFLKNVRISTTV-QTNGQDATGTKCSDEV-YNIITNHQ- 244
           ++N +   VD +K   G  AT+F+ + R++T V + +G  A GT+ +    Y  +   + 
Sbjct: 90  VLNGNFDVVDKIKALVGGSATVFMGDTRVTTNVIKPDGSRAVGTQLAKTAAYEAVFGRKT 149

Query: 245 DYVGTANVLGSEYITKYSPIEDKDGNVVGIIFTGIPKAPFVAVITDTRNEIIIISLLGLL 304
            + G   +LG  Y+T Y PI D  GNV+G+++ GI KA F+     T   ++ +++L   
Sbjct: 150 SFRGEVEILGEPYMTAYDPILDGAGNVIGVLYVGIKKADFLVAAERTLQLMVGVTVLVGA 209

Query: 305 LSILIA-LYTGRKITKPIEELKKGTEEFGNGNYDYKTT-VKTGDELQELSDSFNKMAENV 362
           LSIL++     R +  P++       +  +GN D      +  DE+ E+  +     EN 
Sbjct: 210 LSILVSWTIAKRNLATPLKRSILAMRDLADGNLDVAIRHTERRDEIGEMIRALEIFKEN- 268

Query: 363 KNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADL 422
                                    +R+       +A  +R    +E+      S+V  +
Sbjct: 269 ---------------------GQARHRLEAAQAAEQAARNRRQEAIERLTTDFNSSVFAV 307

Query: 423 IKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENT 482
           +  + E    L    Q +    +     +T VA AA Q +      +A  ++ +    + 
Sbjct: 308 LNGVTESAHHLRDSAQSMTSVAEDTSRQSTVVAAAAEQASVNVETVAAAAEQLA---ASE 364

Query: 483 YEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDG 542
           +E A++V +++E + ++SEE         E+V + +  +   TN                
Sbjct: 365 HEIARQVANSSEISHRASEE--------AERVNSIVLSLSEATN---------------- 400

Query: 543 KKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDIN 602
            +I +V  LI DIA QT LLALNA+IEAARAGDAGKGFAVVA+E+K LA +  ++ EDI 
Sbjct: 401 -RIGQVVTLINDIAAQTNLLALNATIEAARAGDAGKGFAVVANEVKHLATQTARATEDIV 459

Query: 603 HTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQ 662
             I  V     D +               AI  +   +  I ES        + I    +
Sbjct: 460 VQINSVQAVTRDAVS--------------AIGGIGHTISSISESA-------SAIASAVE 498

Query: 663 NASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERVTK 722
             +  T    +N QE ++ + E T++   V        S   ++ G A+E++Q +E++  
Sbjct: 499 EQTAATAEIARNVQEASSGTREVTSSITLVNQGAATTGSAAHQLLGTADELSQQSEQLAT 558

Query: 723 KSSQF 727
           + S+F
Sbjct: 559 EVSEF 563



 Score = 41.6 bits (96), Expect = 1e-07
 Identities = 35/195 (17%), Positives = 84/195 (43%), Gaps = 22/195 (11%)

Query: 350 ELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLE 409
           E+S   ++ AE V +++ ++      +  ++T ++D+  +       A  + +R  +   
Sbjct: 376 EISHRASEEAERVNSIVLSLSEATNRIGQVVTLINDIAAQTNLLALNATIEAARAGD-AG 434

Query: 410 KAINTAVSNVADLIKELREEVELLNIQIQKVE-------DELKGAEETATQVAEAATQVA 462
           K      + V  L  +     E + +QI  V+         + G   T + ++E+A+ +A
Sbjct: 435 KGFAVVANEVKHLATQTARATEDIVVQINSVQAVTRDAVSAIGGIGHTISSISESASAIA 494

Query: 463 EAASDQSAKLQESSEELENTYEGAKEVYS--------------AAEETVKSSEEIKENSE 508
            A  +Q+A   E +  ++    G +EV S              AA + + +++E+ + SE
Sbjct: 495 SAVEEQTAATAEIARNVQEASSGTREVTSSITLVNQGAATTGSAAHQLLGTADELSQQSE 554

Query: 509 TGVEKVENAISRMQS 523
               +V   ++ +++
Sbjct: 555 QLATEVSEFLAAIKA 569