Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 780 a.a., Methyl-accepting chemotaxis protein from Kangiella aquimarina DSM 16071

 Score =  132 bits (332), Expect = 7e-35
 Identities = 92/346 (26%), Positives = 174/346 (50%), Gaps = 29/346 (8%)

Query: 385 DVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADL-IKELREEVELLNIQIQKVEDE 443
           D ++ +A GD T +A  + +          A+++  +L I +LR  V  +N  + +V   
Sbjct: 365 DEIDSLADGDLTVKATVTED-------FTGAIADSFNLTIDQLRGVVGAINEAVDQVSKS 417

Query: 444 LKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYSAAEETVKSSEEI 503
            +  ++T+T +AEA+ Q A+  +  SA + E +  +E     A E    AE++V      
Sbjct: 418 AEETQQTSTALAEASRQQAQEITGASAAINEMAVSIEQVSANASESSQVAEKSV------ 471

Query: 504 KENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLA 563
            E ++ G E V N I  M +I   I E  K IK LGE  ++I  +  LI DIA+QT +LA
Sbjct: 472 -EIAKKGGEVVRNTIRGMDTIREQIQETSKRIKRLGESSQEIGNIVSLINDIADQTNILA 530

Query: 564 LNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGK 623
           LNA+I+A+ AG+AG+GFAVVA E++ LAE    + + I   ++ +              +
Sbjct: 531 LNAAIQASAAGEAGRGFAVVADEVQRLAERSSNATKQIEALVKTI--------------Q 576

Query: 624 DEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGALKNAQEIAALSE 683
            + ++ VI++++    +++      ++ V +  I+  + N ++  +     A++ AA + 
Sbjct: 577 TDTNEAVISMEDTTSEVVRGARLAQDAGVALEEIETVSTNLADLIQSISNAARQQAASAG 636

Query: 684 EFTATAEEVTASTEELNSIIEEIRGIAEEVTQVAERVTKKSSQFKI 729
             + T   +   T + +   +E      ++T+++E + +  S FK+
Sbjct: 637 HVSNTMTVIQEITTQTSEGTQETARSIGKLTELSEDLRRSVSGFKL 682



 Score = 46.6 bits (109), Expect = 5e-09
 Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 39/229 (17%)

Query: 346 DELQELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESREN 405
           DE+Q L++  +   + ++ L+KT+  D  E    + ++ D  + V +G     A  +++ 
Sbjct: 552 DEVQRLAERSSNATKQIEALVKTIQTDTNEA---VISMEDTTSEVVRG-----ARLAQDA 603

Query: 406 NNLEKAINTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAA 465
               + I T  +N+ADLI+ +             V + +   +E  TQ +E   + A + 
Sbjct: 604 GVALEEIETVSTNLADLIQSISNAARQQAASAGHVSNTMTVIQEITTQTSEGTQETARSI 663

Query: 466 SDQSAKLQESSEELENTYEGAK-----------EVYSAAEETVK---------------- 498
                KL E SE+L  +  G K           E  SA E+  +                
Sbjct: 664 G----KLTELSEDLRRSVSGFKLDSTNDDYFRGEEVSAVEDDSEESFENMFDDIEESEES 719

Query: 499 SSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINE 547
           +S E+ E+ E+  E+          +    DEL   +K  GE  ++++E
Sbjct: 720 TSNELDESLESLSEETSELEDASNDLQESSDELEDFLKEAGESLEELDE 768



 Score = 41.6 bits (96), Expect = 2e-07
 Identities = 53/265 (20%), Positives = 110/265 (41%), Gaps = 46/265 (17%)

Query: 285 VAVITDTRNEIIIISLLGLLLSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKT 344
           V++I D  ++  I++L    +    A   GR      +E+++  E   N     +  VKT
Sbjct: 516 VSLINDIADQTNILAL-NAAIQASAAGEAGRGFAVVADEVQRLAERSSNATKQIEALVKT 574

Query: 345 -----GDELQELSDSFNKMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARA 399
                 + +  + D+ +++    + L +   +   E+ T+ TN++D++  ++       A
Sbjct: 575 IQTDTNEAVISMEDTTSEVVRGAR-LAQDAGVALEEIETVSTNLADLIQSISNAARQQAA 633

Query: 400 DESRENNNLE--KAINT-----------AVSNVADLIKELREEVELLNI----------- 435
                +N +   + I T           ++  + +L ++LR  V    +           
Sbjct: 634 SAGHVSNTMTVIQEITTQTSEGTQETARSIGKLTELSEDLRRSVSGFKLDSTNDDYFRGE 693

Query: 436 QIQKVEDELKGA------------EETATQVAEAATQVAEAAS---DQSAKLQESSEELE 480
           ++  VED+ + +            E T+ ++ E+   ++E  S   D S  LQESS+ELE
Sbjct: 694 EVSAVEDDSEESFENMFDDIEESEESTSNELDESLESLSEETSELEDASNDLQESSDELE 753

Query: 481 NTYEGAKEVYSAAEETVKSSEEIKE 505
           +  + A E     +E +   EE K+
Sbjct: 754 DFLKEAGESLEELDEDIFLEEETKK 778