Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 639 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  147 bits (372), Expect = 1e-39
 Identities = 131/535 (24%), Positives = 241/535 (45%), Gaps = 37/535 (6%)

Query: 196 VDSLKERTGNEATIFLKN----VRISTTVQTNGQDATGTKCSDEVYNI--ITNHQDYVGT 249
           VD+L    G  AT+F K     +R+ST V  NG+ A GTK + +   I  I   + Y G 
Sbjct: 111 VDNLTSVMGGTATLFSKTGDDYIRVSTNVIKNGERAIGTKLAPDGKAIKKINQQEAYYGA 170

Query: 250 ANVLGSEYITKYSPIEDKDGNVVGIIFTGIPKAPFVAVITDTRNEIIIISLLGLL----- 304
            ++LGS Y+T Y P+ +  G+VVGI + G      V      ++ ++    + L      
Sbjct: 171 VDILGSPYLTGYEPMFNSSGDVVGIWYVGYSADLNVLEQAIKQSHVLKEGFVALRDAKGN 230

Query: 305 LSILIALYTGRKITKPIEELKKGTEE---FGNGNYDYKTTVKTGDELQELSDS-----FN 356
           + +  A    R++   ++       E   F    YD      T ++   +  S       
Sbjct: 231 IRMHSAHVNDRQVANALQPNDDWVVEVVPFSPWGYDIILVASTSEKSAMVRSSVLVVVLK 290

Query: 357 KMAENVKNLMKTMDMDKVELATLLTNVSDVMNRVAKGD----FTARADESRENNNLEKAI 412
            +  +V  L+    + K  +   L     V+N ++ G+    F  +A  S E   + +A 
Sbjct: 291 IVLASVGILITIWLLVKYIVGKPLEEFIGVVNNLSSGEGDLTFRFQASRSDEFGTMARAF 350

Query: 413 NTAVSNVADLIKELREEVELLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKL 472
           N  +S + D ++ + E  + +  + +++      +++T +Q++     +  A S     +
Sbjct: 351 NGLLSQLQDTLQSVDEATDHMLAKSERLNATALQSKDTVSQLSRETESINNAIS----LM 406

Query: 473 QESSEELENTYEGAKEVYSAAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELG 532
           Q++++ + +T   + E   AA++  ++S          V  +   I  +QS  + +D   
Sbjct: 407 QQNAQTVSSTIRSSSEAAHAADQDTRNS----------VSVLAQTIKDIQSQASDVDASV 456

Query: 533 KSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAE 592
           + I  L +  ++I+ V  +I++IAEQT LLALNA+IEAARAG+ G+GFAVVA E++SLA 
Sbjct: 457 QVITELAQASEEISGVMEVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAS 516

Query: 593 EIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAV 652
             + S E+I + IE + +      +   + K+   K V       D+L +  ++V     
Sbjct: 517 RTQSSTEEIRNMIERLQQGSRVASEKMQQNKETAYKTVDTTKHAGDSLKQALDAVARITT 576

Query: 653 KINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIR 707
                   A+  +E      K    I  +    T  A+EV  + E L   +++++
Sbjct: 577 LNRDAATMAEGQTEVANDVNKGVSSIQQVGNANTTYAKEVVDNCEALVQQVKQMQ 631