Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 673 a.a., chemotaxis methyl-accepting protein from Agrobacterium fabrum C58

 Score =  126 bits (317), Expect = 3e-33
 Identities = 105/421 (24%), Positives = 188/421 (44%), Gaps = 45/421 (10%)

Query: 304 LLSILIALYTGRKITKPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAENVK 363
           LL++L+     R I  PI  +        +G  D  T V   D      D   KMA+ V 
Sbjct: 200 LLAVLLIWALSRSIVTPIVGMTAAMSRLADG--DLTTEVPATDR----GDEVGKMAKAVL 253

Query: 364 NLMKTMDMDKVELATLLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLI 423
            + K   ++K  LA     +    +   + +   +A +   +      +   ++ +AD  
Sbjct: 254 -VFKEAGLEKSRLAGETDRMRSATDAERRRNEEEKARDEAASAFASAELGKGLAALADGD 312

Query: 424 KELREEVELL----------NIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQ 473
              R E   +          N  ++K++  L+   E A  +   A+++  AA D S + +
Sbjct: 313 LSYRIETPFVPAIDPVRVNFNSAVEKLQQALRTVGENAAAINAGASEMLSAADDLSRRTE 372

Query: 474 ESSEELENTYEGAKEVYSAAEETVKSSEE---IKENSETGVEK----VENAISRMQSITN 526
           + +  +E T    +EV +   ++ + +E+   + + +  G EK    V  A++ M+ I  
Sbjct: 373 QQAASIEETAAALEEVTTTVRDSARGAEDAGNLVQRARAGAEKSGVVVRKAVAAMREIEK 432

Query: 527 VIDELGKSIKMLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASE 586
              E+G  I              G+I DIA QT LLALNA +EAARAGDAGKGFAVVA E
Sbjct: 433 SSGEIGNII--------------GVIDDIAFQTNLLALNAGVEAARAGDAGKGFAVVAQE 478

Query: 587 IKSLAEEIKKSVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKES 646
           ++ LA+    + ++I   I   ++++++ ++L  +    ++  V  ++E+N  +  I  +
Sbjct: 479 VRELAQRSANAAKEIKTLIGASSQQVENGVNLVDETGKALELIVSEVEEINAHVSAIVVA 538

Query: 647 VNESAVKINGIKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEI 706
             E A  +  I        + T       Q+ AA+ E+ TA +  +    E LNS++ + 
Sbjct: 539 AREQATGLQEINTAVNTMDQGT-------QQNAAMVEQQTAASHSLAREAEALNSLLGQF 591

Query: 707 R 707
           R
Sbjct: 592 R 592



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 51/302 (16%), Positives = 116/302 (38%), Gaps = 11/302 (3%)

Query: 421 DLIKELREEVELLNIQIQKV-EDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEEL 479
           D++K + +  +   +  +++ E ++   + T   ++E        A  Q    + ++ ++
Sbjct: 106 DILKSIDDMEKSATVFFKELAEPQIAARKTTEAPISEIIEIGRNQAKGQLDGFRAAAAKI 165

Query: 480 ENTYEGAKEVYSAAEETVKSSEE---IKENSETGVEKVENAISRMQSITNVIDELGKSIK 536
           +    G   VY+A ++    + E   +   +  G+  V    +  +SI   I  +  ++ 
Sbjct: 166 KEQLNGLSTVYAAEQQAAARNLEYALLGGGAVAGLLAVLLIWALSRSIVTPIVGMTAAMS 225

Query: 537 MLGEDGKKINEVTGLIKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKK 596
            L  DG    EV     D  ++ G +A  A +    AG      A     ++S  +  ++
Sbjct: 226 RLA-DGDLTTEVPAT--DRGDEVGKMA-KAVLVFKEAGLEKSRLAGETDRMRSATDAERR 281

Query: 597 SVEDINHTIEGVNKRIDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKING 656
             E+     E  +      +  GL    + D           A+  ++ + N +  K+  
Sbjct: 282 RNEEEKARDEAASAFASAELGKGLAALADGDLSYRIETPFVPAIDPVRVNFNSAVEKL-- 339

Query: 657 IKHGAQNASENTEGALKNAQEIAALSEEFTATAEEVTASTEELNSIIEEIRGIAEEVTQV 716
            +   +   EN       A E+ + +++ +   E+  AS EE  + +EE+     +  + 
Sbjct: 340 -QQALRTVGENAAAINAGASEMLSAADDLSRRTEQQAASIEETAAALEEVTTTVRDSARG 398

Query: 717 AE 718
           AE
Sbjct: 399 AE 400