Pairwise Alignments

Query, 729 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 607 a.a., methyl-accepting chemotaxis protein A from Agrobacterium fabrum C58

 Score =  129 bits (325), Expect = 3e-34
 Identities = 111/463 (23%), Positives = 196/463 (42%), Gaps = 70/463 (15%)

Query: 274 IIFTGIPKAPFVAVITDTRNEIIIISLLGLLLSILIALYTGRKITKPIEELKKGTEEFGN 333
           ++ TG+      A +     + + I  L  +L++  A Y  R I+KP+ ++ +   E  N
Sbjct: 168 VVVTGVYIDDLNAQVRGEVMKALSIGALIFVLALAAAFYVIRGISKPLGDIHRALGEVAN 227

Query: 334 GNYDY---------------KTTVKTGDELQELSDSFNKMAENVKNL----MKTMDMDKV 374
            N                  K T    D+++E      +  E  + L       +DM + 
Sbjct: 228 ENVSLAIPHTGLTNEVGMMAKATASLQDKVRERHAMQRREEEQQQQLDAERQNNLDMQRD 287

Query: 375 ELAT---LLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVE 431
           E A    ++  + + + ++A GD T R  +     N   A+    +     +     +V 
Sbjct: 288 EAALQARVVATIGEALEKLAGGDLTVRCGDL---GNRYAALRDNFNEALTHLDAAMAKVN 344

Query: 432 LLNIQIQKVEDELKGAEETATQVAEAATQVAEAASDQSAKLQESSEELENTYEGAKEVYS 491
             +I I   +DE++          +A+ ++++    Q+A L+E+S  L+      ++   
Sbjct: 345 TKSIDIGGSKDEIR----------KASNELSQRTERQAANLEETSAALDELTVAVRQTAE 394

Query: 492 AAEETVKSSEEIKENSETGVEKVENAISRMQSITNVIDELGKSIKMLGEDGKKINEVTGL 551
            A +  K    +   +      VE AI+ M  I    D+              I+ + G+
Sbjct: 395 GAADAAKRVTTVSSEATRSDRVVEEAITAMSGIEQSSDQ--------------ISNIIGV 440

Query: 552 IKDIAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINHTIEGVNKR 611
           I  IA QT LLALNA +EAARAG+AGKGFAVVA E++ LA++   + ++I   I      
Sbjct: 441 IDVIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQKSAAAAKEIKDQI------ 494

Query: 612 IDDTIDLGLKGKDEVDKGVIAIDEVNDALLKIKESVNESAVKINGIKHGAQNASENTEGA 671
                    +   +V+ GV  + E  DAL +I + +  +   ++ I H A          
Sbjct: 495 --------ARSSAQVENGVRLVGEAGDALKRISDQIKSANEIVSKIAHSAAEQDTTLRSI 546

Query: 672 LKNAQEI-------AALSEEFTATAEEVTASTEELNSIIEEIR 707
             +  ++       AA++EE TA+AE +   TEEL ++I   R
Sbjct: 547 STSLNQLDVATQHNAAMAEETTASAEALAVDTEELLNLIRGFR 589