Pairwise Alignments

Query, 542 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 576 a.a., sodium:proton antiporter from Pseudomonas simiae WCS417

 Score =  157 bits (397), Expect = 1e-42
 Identities = 124/522 (23%), Positives = 247/522 (47%), Gaps = 18/522 (3%)

Query: 2   LKQPLIIGYILTGILVSPYFLNIVRFEESISTLGHYGVTILLFMVGISLNPGYFKEIGKI 61
           L+ P ++GY+  G+ V P  L+ V   E +  L   GV  LLF +G+  +      + ++
Sbjct: 22  LQLPPVLGYLCVGLAVGPTALDWVNDSEELPDLAELGVVFLLFSLGLEFSLTKMLALRRV 81

Query: 62  SLITGLGQILFTFSIGFLISVFLGYSLIESMYISIALTFSSTIIIMKLISDKGDIDKLYG 121
               G  Q+L    +  L+ + LG +   ++ +   L  SST I+ K ++  G+I   +G
Sbjct: 82  VFGLGSLQVLGCGVLLGLLLMILGVAPGIALLLGAGLALSSTAIVSKELTSLGEIFSSHG 141

Query: 122 KISIGFLIVQDIVAMAILVLISAFNVQSGAGE-----LLFLIISKIVLILTAIYIFTKYA 176
           + +IG L+ QD+VA+ +L L+  F   +G GE      L L + K V++   + + +++ 
Sbjct: 142 QNAIGVLLFQDVVAVLLLTLVPVF---AGTGEQAWYWALPLTLGKTVVLFVGLLLASRWL 198

Query: 177 LSNFIS--YASKNQEFLFLFSLMWCFTLASLFHLLGFSSEIGALIAGIVLAIFPERYEIA 234
           L        AS + E   L +L+     A L HLLG S  +GA +AG++L     R++I 
Sbjct: 199 LPRLFHEVAASHSAELFVLLALVIVLLTAWLTHLLGLSPALGAFLAGMLLGESHYRHQIE 258

Query: 235 SKVRPLRDFFLILFFVVLGVQMTFETSGNFIIPAIILSIFVLFGNPIIVMILMGAFGYTK 294
           + +RP RD  L LFFV +G+ +  +   +  +  + L++ ++     +V +L+   G   
Sbjct: 259 ADIRPFRDILLGLFFVSIGMLIDLQLFVSHSVLILGLTLTLMLVKGCVVAVLVKLRGSDS 318

Query: 295 KTGFLAGLTVAQISEFSLIIASLGLRNGHISQEIVSMITLIGIMTIAGSSYFITYSERIY 354
           +T + +GL +AQ  EF   + +   ++  I  E   ++      ++  +   +  +  I 
Sbjct: 319 ETAWRSGLALAQGGEFCFALMAQMQQSRLIPDEFNGLLLAATFCSMLLTPLLLRAAPGIA 378

Query: 355 ALLSNYLSIFEKKTKISEKDFKNKN-TGEIILFGADRTGKNILNVIENSKERFLIIDYNP 413
             L    +   ++ ++ E    N    G  ++ G  R G++I   +   ++ ++ +D +P
Sbjct: 379 LRLHRKPN---QQVQLEEITALNAELRGHAVICGYGRVGQSIGRFLRKEQQAYIALDDDP 435

Query: 414 KIIKNLSKRGYNSVYGDASNLELLNELNFKESKMLISTISDIETDILLIKTILKSNKNAI 473
           + ++  +    +  YGD     LL+ +  + +++++  + + +  + ++K   + N    
Sbjct: 436 ERVQEAATEDSSVHYGDCRRGALLSAVGVERARLVVIAVDNSDVALAVLKEARRINAEVP 495

Query: 474 IIVIAHKIEDAIKLYEEGASYVIMPHFLGSIHASLMIQKYGL 515
           I+V         +L   GAS V+ P  L S   SLM+  + L
Sbjct: 496 ILVRTRDDSQLAELKAAGASEVV-PELLES---SLMLASHAL 533