Pairwise Alignments

Query, 542 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 568 a.a., Inner membrane protein YbaL, KefB/KefC family from Variovorax sp. SCN45

 Score =  155 bits (392), Expect = 4e-42
 Identities = 126/535 (23%), Positives = 255/535 (47%), Gaps = 26/535 (4%)

Query: 2   LKQPLIIGYILTGILVSPYFLNIVRFEESISTLGHYGVTILLFMVGISLNPGYFKEIGKI 61
           L+ P ++GY+L G+++ P+    V      + L   GV +L+F VG+  +      + KI
Sbjct: 28  LRLPALVGYLLAGVIIGPFTPGFVADAGIAAQLAEIGVMLLMFGVGLHFSLDDLLAVRKI 87

Query: 62  SLITGLGQILFTFSIGFLISVFLGYSLIESMYISIALTFSSTIIIMKLISDKGDIDKLYG 121
           +L   L QI     +G  ++++ G+S   ++   +AL+ +ST+++++ +   G +D   G
Sbjct: 88  ALPGALAQIAVATLLGGGLAMWWGWSPGAALVFGLALSVASTVVLLRALESLGILDSFTG 147

Query: 122 KISIGFLIVQDIVAMAILVL-------ISAFNVQSGAGELLFLIISKIVLIL---TAIYI 171
           +I+IG+L+V+D+  + +LVL       +     Q G  + L+  +   +L +    A+ +
Sbjct: 148 RIAIGWLVVEDLAMVLVLVLMPPLAGTLGGHAAQEGPADPLWQTLGLTLLQVGGFVALML 207

Query: 172 FTKYALSNFISYASKNQEFLFLFSLMWCFTLASLFH----LLGFSSEIGALIAGIVLAIF 227
                +  +I +         LF+L       S+      L G S  +GA  AG+V+   
Sbjct: 208 VVGRRVFPWILWQVTRTGSRELFTLCVVAAAVSIAFASAALFGVSFALGAFFAGMVMRES 267

Query: 228 PERYEIASKVRPLRDFFLILFFVVLGVQMTFETSGNFIIPAIILSI--FVLFGNPIIVMI 285
              +  A +  PLRD F +LFFV +G  M F+ S     P  +L++   ++ G  +    
Sbjct: 268 QFAHRAAEESLPLRDAFAVLFFVSVG--MLFDPSVLIERPLQVLAVVLVIVLGKSLAACA 325

Query: 286 LMGAFGYTKKTGFLAGLTVAQISEFSLIIASLGLRNGHISQEIVSMITLIGIMTIAGS-- 343
           L+  F Y   T      ++AQI EFS I+A LG+  G +  E  S++    +++IA +  
Sbjct: 326 LVLVFRYPLGTALTVSASLAQIGEFSFILAGLGVSLGLLPVEGQSLVLAGALISIATNPL 385

Query: 344 --SYFITYSERIYALLSNYLSIFEKKTKISEKDFKNKN---TGEIILFGADRTGKNILNV 398
             S      + ++A  S    +  +   ++E     +    + +++L G  R G+ I   
Sbjct: 386 WFSLIAPMQKWLHAHSSFARGLESRDDPLAELPMTTEAKYLSRQVVLVGYGRVGRRIAAE 445

Query: 399 IENSKERFLIIDYNPKIIKNLSKRGYNSVYGDASNLELLNELNFKESKMLISTISDIETD 458
           ++ +   +++ + N ++++ L + G  +V+GDA++  +L + +   +++L+    D    
Sbjct: 446 LDANDIPYVVAEQNRELVEKLREAGTPAVWGDAADPAVLIQAHVARARVLVVATPDAMNV 505

Query: 459 ILLIKTILKSNKNAIIIVIAHKIEDAIKLYEEGASYVIM-PHFLGSIHASLMIQK 512
             +I+T    N     ++ +H  ++A  L +E A+ V +  H L    A  ++Q+
Sbjct: 506 RQMIETARTLNPTIQTVIRSHNEQEAKLLTQETAATVFLGEHELAQAMARDVVQR 560