Pairwise Alignments

Query, 542 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 661 a.a., Inner membrane protein, KefB/KefC family from Variovorax sp. SCN45

 Score =  170 bits (430), Expect = 2e-46
 Identities = 128/528 (24%), Positives = 252/528 (47%), Gaps = 21/528 (3%)

Query: 2   LKQPLIIGYILTGILVSPYFLNIVRFEESISTLGHYGVTILLFMVGISLNPGYFKEIGKI 61
           LK P ++GY+  G+L+ P+   + +  E I  LG +GV  L+F++G+  +    + + K 
Sbjct: 24  LKLPPMLGYLSAGVLIGPHAFALAQNSEGIRHLGEFGVVFLMFVIGLEFSLPKLRAMRKH 83

Query: 62  SLITGLGQILFTFSIGFLISVFLGYSLIES--------MYISIALTFSSTIIIMKLISDK 113
               GL Q+L T +I  + ++ +   L  S        + +S ALT SST I++KL++++
Sbjct: 84  VFGLGLLQVLLTMTIATVGALLIARLLPPSWQLGWQTALALSGALTMSSTAIVVKLMAER 143

Query: 114 GDIDKLYGKISIGFLIVQDIVAMAILVLISAFNVQSGA-GELLFLIISKIVLILTAIYIF 172
            +++  +GK  +G L+ QD+  + +LVLI A      A  + L L + K   ++  +   
Sbjct: 144 LELESEHGKRVMGVLLFQDLAVVPLLVLIPALGAPPEALAKALGLALLKATFLIGVLLYG 203

Query: 173 TKYALSNFISYAS--KNQEFLFLFSLMWCFTLASLFHLLGFSSEIGALIAGIVLAIFPER 230
               +  +++  +  +++E   L  L+    LA L  L G S  +GA IAG++++    +
Sbjct: 204 GPRVMRWWLTLVARRRSEELFILNVLLVTLGLAWLTELAGLSLALGAFIAGMLVSETEYK 263

Query: 231 YEIASKVRPLRDFFLILFFVVLGVQMTFETSGNFIIPAIILSIFVLFGNPIIVMILMGAF 290
           +++ + +RP  D  L LFF+ +G+ + +       +   +L +  L     +V +L    
Sbjct: 264 HQVETDIRPFHDVLLGLFFITVGMSLDWHIVVERWMLVGVLLLVPLGFKLGLVTVLARVL 323

Query: 291 GYTKKTGFLAGLTVAQISEFSLIIASLGLRNGHISQEIVSMITLIGIMTIAGSSYFITYS 350
           G T       GL +AQ  EF  ++ +L      +   + + +    ++++  + + I YS
Sbjct: 324 GATSGVSLRTGLYLAQAGEFGFVLLTLAQERSLLPPWLANPVLASMVLSMLATPFIIMYS 383

Query: 351 ERIYALL--SNYLSIFEKKTKISEKDFKNKNTGE-IILFGADRTGKNILNVIENSKERFL 407
             I   L  S++L    + T I+ K     NT + +I+ G  R G+N+  ++E     ++
Sbjct: 384 NAIVRKLVASDWLQQSLQMTSIARKTI---NTAQHVIICGYGRCGQNLARILEREGIPYM 440

Query: 408 IIDYNPKIIKNLSKRGYNSVYGDASNLELLNELNFKESKMLISTISDIETDILLIKTILK 467
            +D +P  ++  +  G + V+GDA+ L+ L       +  ++ T  D+   + ++     
Sbjct: 441 ALDLDPDRVRQAAAAGDSVVFGDAARLQALMAAGLARASAVVVTYLDVPGAMKVLANARA 500

Query: 468 SNKNAIIIVIAHKIEDAIKLYEEGASYVIMPHFLGSIHASLMIQKYGL 515
              +  +IV      D  KL   GA+ V+      +I  SLM+  + L
Sbjct: 501 HAAHVPVIVRTQDDHDLEKLQAAGATEVVPE----AIEGSLMLASHAL 544