Pairwise Alignments

Query, 542 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 586 a.a., putative Sodium/proton antiporter from Pseudomonas putida KT2440

 Score =  156 bits (395), Expect = 2e-42
 Identities = 99/365 (27%), Positives = 189/365 (51%), Gaps = 11/365 (3%)

Query: 3   KQPLIIGYILTGILVSPYF--LNIVRFEESISTLGHYGVTILLFMVGISLNPGYFKEIGK 60
           KQP+++GYI+ G ++ P+     ++  E++I TL   GV  L+F +G+  +     ++G 
Sbjct: 28  KQPVVLGYIVAGFIIGPHTPPFGLIHDEDTIKTLAELGVIFLMFCLGLEFSLRKLFKVGA 87

Query: 61  ISLITGLGQILFTFSIGFLISVFLGYSLIESMYISIALTFSSTIIIMKLISDKGDIDKLY 120
            + I    +I+    IGF I  + G+S ++S+++   L  SST II+K ++D    ++ +
Sbjct: 88  TAFIAAFLEIVLMIWIGFEIGRWFGWSTMDSLFLGAILAISSTTIIVKALNDLKMKNERF 147

Query: 121 GKISIGFLIVQDIVAMAILVLISAFNVQS--GAGELLFLIISKIVLILTAIYIFTKYALS 178
            ++  G LIV+DI+ + I+ L+S   V     +GE +F  + K+ L +    +     + 
Sbjct: 148 AQLIFGVLIVEDILGIGIIALLSGIAVSGTVSSGE-VFSTVGKLSLFMVVALVIGILLVP 206

Query: 179 NFISYASK--NQEFLFLFSLMWCFTLASLFHLLGFSSEIGALIAGIVLAIFPERYEIASK 236
             ++Y ++  + E L +  L  CF    L   L +S  +GA + G ++A   +  +I   
Sbjct: 207 RLLAYVARFESNEMLLITVLGLCFGFCLLVVKLEYSMVLGAFLIGAIMAESRQLLKIERL 266

Query: 237 VRPLRDFFLILFFVVLGVQMTFETSGNFIIPAIILSIFVLFGNPIIVMILMGAF--GYTK 294
           + P+RD F  +FFV +G+ +  E   ++  P +++++ V+ G   ++   MGAF  G   
Sbjct: 267 IEPVRDLFSAIFFVAIGMMIDPEVLIDYAWPIVVITLAVVLGK--MLSCGMGAFIAGNDG 324

Query: 295 KTGFLAGLTVAQISEFSLIIASLGLRNGHISQEIVSMITLIGIMTIAGSSYFITYSERIY 354
           +T    G+ ++QI EFS IIA+LG+     S  +  +   +  +T   + Y I  ++ + 
Sbjct: 325 RTSLRVGMGLSQIGEFSFIIAALGMTLQVTSDFLYPVAVAVSAITTLLTPYLIRAADPLS 384

Query: 355 ALLSN 359
             L N
Sbjct: 385 QKLGN 389