Pairwise Alignments

Query, 542 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 558 a.a., predicted transporter with NAD(P)-binding Rossmann-fold domain (NCBI) from Escherichia coli BW25113

 Score =  164 bits (415), Expect = 8e-45
 Identities = 135/512 (26%), Positives = 243/512 (47%), Gaps = 31/512 (6%)

Query: 7   IIGYILTGILVSPYFLNIVRFEESISTLGHYGVTILLFMVGISLNPGYFKEIGKISLITG 66
           ++GY+L G+L  P+    V   +    L   GV +L+F VG+  +      +  I++   
Sbjct: 33  LVGYLLAGVLAGPFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGA 92

Query: 67  LGQILFTFSIGFLISVFLGYSLIESMYISIALTFSSTIIIMKLISDKGDIDKLYGKISIG 126
           + QI     +G  +S  LG+SL+  +   + L+ +ST+++++ + ++  ID   G+I+IG
Sbjct: 93  IAQIAVATLLGMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIG 152

Query: 127 FLIVQDIVAMAILVLISAFNVQSGAGELLF--------LIISKIVLILTAIYIFTKYALS 178
           +LIV+D+V +  LVL+ A       G++ F        + I K++  + AI +     L 
Sbjct: 153 WLIVEDLVMVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFI-AIMMLVGRRLV 211

Query: 179 NFI---SYASKNQEFLFLFSLMWCFTLA-SLFHLLGFSSEIGALIAGIVLAIFPERYEIA 234
            +I   S A+ ++E   L  L     +A     L   S  +GA  AG+VL      +  A
Sbjct: 212 PWIMARSAATGSRELFTLSVLALALGVAFGAVELFDVSFALGAFFAGMVLNESELSHRAA 271

Query: 235 SKVRPLRDFFLILFFVVLGVQMTFETSGNFIIPAIILS--IFVLFGNPIIVMILMGAFGY 292
               PLRD F +LFFV +G  M F+       P  +L+    +LFG  +    L+  FG+
Sbjct: 272 HDTLPLRDAFAVLFFVSVG--MLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGH 329

Query: 293 TKKTGFLAGLTVAQISEFSLIIASLGLRNGHISQEIVSMITLIGIMTIAGSSYFITYSER 352
           +++T      ++AQI EF+ I+A LG+    + Q   +++       +AG+   I  +  
Sbjct: 330 SQRTALTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLV-------LAGAILSIMLNPV 382

Query: 353 IYALLSNYLSIFE-------KKTKISEKDFKNKNTGEIILFGADRTGKNILNVIENSKER 405
           ++ALL  YL+  E       ++    EK          +L G  R G  +   +  S   
Sbjct: 383 LFALLEKYLAKTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIP 442

Query: 406 FLIIDYNPKIIKNLSKRGYNSVYGDASNLELLNELNFKESKMLISTISDIETDILLIKTI 465
            ++I+ +   +  L +RG  +V G+A+N E++   + + +K LI TI +      ++ + 
Sbjct: 443 LVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASA 502

Query: 466 LKSNKNAIIIVIAHKIEDAIKLYEEGASYVIM 497
              N +  II  AH  ++   + E GA+ V+M
Sbjct: 503 RAKNPDIEIIARAHYDDEVAYITERGANQVVM 534