Pairwise Alignments

Query, 328 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 295 a.a., tyrosine recombinase XerC from Rhodanobacter sp000427505 FW510-R12

 Score = 46.6 bits (109), Expect = 8e-10
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 14/156 (8%)

Query: 158 IRDLVVIRMLWDTGARVSEVLNLKYEDCDFENGEFRLRNTKSHEERKVVCSSDTLELLKC 217
           +RD  ++ + + +G R+SE++ L + D + ++GE R+   K  + R V      +  L+ 
Sbjct: 132 VRDRAMLELFYSSGLRLSELVGLHWLDLNLDDGEVRVLG-KGSKTRIVPVGRHAVAALRA 190

Query: 218 LASYNFKKEPKDY-LFQSTNQENLGKIADRNQITRTFGRAVDKLKEEEKIQQNKRYVVHS 276
           L +   +  P D  +F+      +          RT    ++KL  ++ I   K    H 
Sbjct: 191 LGAA--EGMPADGPVFRGRGGAPINP--------RTVQLRMNKLALQQGIP--KHIHPHL 238

Query: 277 LRHGRAVDLLNKGVPIDVVKEILGHRSLETTLYYSH 312
           LRH  A  +L     +  V+E+LGH  + TT  Y+H
Sbjct: 239 LRHTFASHMLESSGDLRAVQELLGHADIATTQIYTH 274