Pairwise Alignments

Query, 328 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 292 a.a., integrase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 65/272 (23%), Positives = 112/272 (41%), Gaps = 12/272 (4%)

Query: 42  NTIIGDLTKLGVFLEFAQQRLEKEPDELYKTDFIKFFNYLEKERKISKNTQNRYFNLLKV 101
           +T+    T LG F  + QQ  +           I+ +     +  I   + NR    L+ 
Sbjct: 17  HTLTSYHTDLGQFAAYLQQVYDITDAAEADHTIIRSWILTLVQNNIKPRSINRKIACLRS 76

Query: 102 FYRAFKLDNFMDFRDESNERKRFSSSRIEVKHYDAITEQDLNLVIAKIFENQSSTKIRDL 161
           +YR          R + N   R  + +   K    + E+  N ++       +    RD 
Sbjct: 77  YYRFLLAQE----RVKVNPMLRIKAPKATKKLPAFVQEEPFNNLLDSFSFEDTFEGQRDR 132

Query: 162 VVIRMLWDTGARVSEVLNLKYEDCDFENGEFRLRNTKSHEERKVVCSSDTLELLKCLASY 221
           + +  L+ TG R++E++N+  E  D E     +R      + ++V  +D+L     LA  
Sbjct: 133 LTLEFLYGTGIRLAELINI--EPSDIEERAKTVRVLGKGNKERIVPLNDSL----LLALD 186

Query: 222 NFKKEPKDYLFQSTNQENLGKIADRNQITRTFGRAVDKLKEEEKIQQNKRYVVHSLRHGR 281
            +K E   +L  + + + L     R    +   R V K      I  ++    H LRH  
Sbjct: 187 AYKTEKSHFLGDNNSVKLLVTNKGRPLYPKFVYRVVKKYIS--LITTSEHNSPHVLRHSF 244

Query: 282 AVDLLNKGVPIDVVKEILGHRSLETTLYYSHS 313
           A  LLNKG  ++ +K++LGH SL  T  Y+H+
Sbjct: 245 ATHLLNKGADLNAIKDLLGHASLAATQVYTHN 276