Pairwise Alignments

Query, 328 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 475 a.a., integrase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 61.2 bits (147), Expect = 5e-14
 Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 15/167 (8%)

Query: 146 IAKIFENQSSTKIRDLVVIRMLWDTGARVSEVLNLKYEDCDFENGEFRLRNTKSHEERKV 205
           + KI     + K R L  +++L+  G R+ EV+NL+  D   E     +R  K  ++R  
Sbjct: 308 VLKILSATDNLKHRCL--LQLLYAGGLRIGEVINLRLTDVQSERNLLLIRGGKGKKDRTT 365

Query: 206 VCSSDTLELLKCLASYNFKKEPKDYLFQSTNQENLGKIADRNQITRTFGRAVDKLKEEEK 265
           + S   LE L+   +Y     PK +LF+          + RN    +          +EK
Sbjct: 366 LLSQRLLENLR---AYYKAYRPKVWLFEGQTGGQYTVESIRNVFRAS----------KEK 412

Query: 266 IQQNKRYVVHSLRHGRAVDLLNKGVPIDVVKEILGHRSLETTLYYSH 312
                    H+LRH  A  LL +G  +  ++ +LGHRS +TT  Y+H
Sbjct: 413 AGVKAPATPHTLRHSFATHLLEQGTDLRYIQVLLGHRSSKTTEVYTH 459