Pairwise Alignments

Query, 328 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 285 a.a., integrase from Magnetospirillum magneticum AMB-1

 Score = 58.5 bits (140), Expect = 2e-13
 Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 13/154 (8%)

Query: 158 IRDLVVIRMLWDTGARVSEVLNLKYEDCDFENGEFRLRNTKSHEERKVVCSSDTLELLKC 217
           +++   +   + TG RVSEV+ LK  D D      R+   K  ++R V+ S+   +LL  
Sbjct: 120 LKNRTALTTAYATGLRVSEVVALKLADIDSGRMVIRVEQGKGRKDRYVMLSA---QLLGI 176

Query: 218 LASYNFKKEPKDYLFQSTNQENLGKIADRNQITRTFGRAVDKLKEEEKIQQNKRYVVHSL 277
           L +Y     P+ +LF     + +      N   R+   A            +KR  VH+L
Sbjct: 177 LRTYWPLARPEHWLFPGREDKPIEPTV-LNSACRSACVAAGI---------DKRVTVHTL 226

Query: 278 RHGRAVDLLNKGVPIDVVKEILGHRSLETTLYYS 311
           RH  A  LL  G  I +++ +LGH +L TT  Y+
Sbjct: 227 RHSFATHLLEAGTDIRIIQVLLGHNNLSTTARYT 260