Pairwise Alignments

Query, 328 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 302 a.a., tyrosine recombinase XerC from Dickeya dianthicola ME23

 Score = 53.1 bits (126), Expect = 8e-12
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 14/157 (8%)

Query: 158 IRDLVVIRMLWDTGARVSEVLNLKYEDCDFENGEFRLRNTKSHEERKVVCSSDTLELLKC 217
           +RD  ++ +++  G R++E++ L     D ++GE  +    S E +  + ++    L   
Sbjct: 136 VRDRAMLEVMYGAGLRLAELVGLDCGHVDLDSGEVWVMGKGSKERKLPIGATAVTWLRHW 195

Query: 218 LASYNFKKEPKDYLFQSTNQENLGKIADRNQITRTFGRAVDKLKEEEKIQQ--NKRYVVH 275
           LA  +      D +F S+    LGK        R   R V K   E  ++Q  N     H
Sbjct: 196 LAIRDIYAPEGDAVFISS----LGK--------RISMRNVQKRFAEWGVKQGVNSHVNPH 243

Query: 276 SLRHGRAVDLLNKGVPIDVVKEILGHRSLETTLYYSH 312
            LRH  A  +L     +  V+E+LGH +L TT  Y+H
Sbjct: 244 KLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTH 280