Pairwise Alignments

Query, 328 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 337 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 81.3 bits (199), Expect = 3e-20
 Identities = 74/294 (25%), Positives = 139/294 (47%), Gaps = 18/294 (6%)

Query: 37  DGIKENTIIGDLTKLGVFLEFAQQ----RLEKEP-DELYKTDFIKFFNYLEKERKISKNT 91
           +G   NTI        + L F ++    +LEK   D + K   + F ++++ ERK S +T
Sbjct: 22  NGASLNTITAYRDTFVLLLSFIEKHRKVKLEKLTLDYITKETIVAFLDWIQSERKCSNST 81

Query: 92  QNRYFNLLKVFYRAFKLDNFMDFRDESNERKRFSSSRIEVKHYDAITEQDLNLVIAKIFE 151
           +N     +  FYR  +  +     D   E +R  S R +    D+I    +  +   + +
Sbjct: 82  RNLRLAAIHSFYRYLQYQHL----DNLYECQRILSIRSKKTAKDSIKYLSVEGIRLLLQQ 137

Query: 152 NQSSTKI--RDLVVIRMLWDTGARVSEVLNLKYEDCDFENGEFRLRNTKSHEERKV-VCS 208
             ++T+   R+L ++ +++DTGARV E+++L       +         K ++ R V +  
Sbjct: 138 PDTTTRKGRRNLALLALMYDTGARVQEIIDLTPSMLRLDKPATIKIIGKGNKARLVPMLD 197

Query: 209 SDTLELLKCLASYNFKK-EPKDY-LFQSTNQENLGKIADRNQITRTFGRAVDKLKEEEKI 266
           + T+ L   L  Y       K Y LF ++ +E L +      I +  G A    ++E K+
Sbjct: 198 AQTVHLKNYLKEYELDSPSAKLYPLFSNSKKEKLTRAGINYIIQKYVGMA----RKENKL 253

Query: 267 QQNKRYVVHSLRHGRAVDLLNKGVPIDVVKEILGHRSLETTLYYSHSRQRKEQM 320
               +   HS RH +A+ LL  GV +  +++ILGH S++TT  Y+ +  +++++
Sbjct: 254 MIPLKITCHSFRHTKAMHLLQAGVNLVYIRDILGHVSVQTTEIYARADSKQKRI 307