Pairwise Alignments

Query, 328 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 306 a.a., Tyrosine recombinase XerD from Acinetobacter radioresistens SK82

 Score = 66.6 bits (161), Expect = 7e-16
 Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 14/167 (8%)

Query: 158 IRDLVVIRMLWDTGARVSEVLNLKYEDCDFENGEFRLRNTKSHEERKVVCSSDTLELLKC 217
           +RD  ++ +L+  G RV+E+LNL+ E  + + G  R+   K ++ER V      +E ++ 
Sbjct: 143 LRDRAMLEVLYACGLRVTELLNLRLELINLKQGYLRITG-KGNKERLVPLGQVAIEWVEK 201

Query: 218 L---ASYNFKKEPKDYLFQSTNQENLGKIADRNQITRTFGRAVDKLKEEEKIQQNKRYVV 274
               A     K   DYLF + +    G I  R    + F  A+ +   +  IQ       
Sbjct: 202 YLNEARPQLYKSATDYLFLTQH----GGIMSR----QNFWYAIKRYALQAGIQAELS--P 251

Query: 275 HSLRHGRAVDLLNKGVPIDVVKEILGHRSLETTLYYSHSRQRKEQML 321
           H+LRH  A  LLN G  + VV+ +LGH  L TT  Y+H  Q + Q L
Sbjct: 252 HTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQIRMQQL 298