Pairwise Alignments

Query, 447 a.a., putative DNA binding domain-containing protein from Methanococcus maripaludis S2

Subject, 484 a.a., AAA family ATPase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 113/480 (23%), Positives = 213/480 (44%), Gaps = 54/480 (11%)

Query: 4   LTKKQVTDLINTGEGYTLEFKE---SLNASLAKEICAFANSDGGHILLGVTDSGDITGY- 59
           ++ K++  L+  GEG   EFK+   SL  +L + +CAF N  GG I LGV D G + G  
Sbjct: 1   MSDKRILQLLQEGEGLRTEFKKASTSLPKNLFETVCAFLNRAGGSIFLGVDDDGSVLGVD 60

Query: 60  PLS----NQDDARITDIARNMDPSFSVNLEKVD----NVVVITVPKGENKPYSTGGLYYV 111
           P S      D A +++ A+ ++P F +  E+ +     ++ I VP+  ++ + T G  + 
Sbjct: 61  PASVGKLKTDLANLSNNAQKLEPPFILFPEEYELDGKAILHIQVPE-SSQVHRTNGAIFD 119

Query: 112 RNGSQSQKLKRE-EVIELFKYNGLISFEE--IPNKEFDLKKDLNNSALNNFITASGITN- 167
           R+     +L    +V EL+        E    P   FD  K      + N I +    + 
Sbjct: 120 RSEDGDYRLNNHGQVAELYNRKRAHFTENTIYPYLGFDDFKPELFPKVRNLIYSRDPGHP 179

Query: 168 --KLKKEDLLNNLYLLKDGFLKNAGVLYFCNNSTKFFRNAHITCVL----YEGTSKSNIL 221
              +  E LL      +  F  N    Y    +  F R+  I  VL     +   +   L
Sbjct: 180 WLAMDDEQLLRTAGFYRRDFATNQEG-YTLAAALVFGRDEVIQQVLPHYKIDALVRREDL 238

Query: 222 DRKDFSKDIYSNFNDSFDYICSKLNTEYIIGKERVE---RLELPKEAIREALVNSIAHRD 278
           DR D    I +N  ++++ + + +  +++  +  +E   R+ L  +  RE + N I HR+
Sbjct: 239 DRYDDRAYIQTNLIEAYEQLMAFI-AKHLPDRFHMEGDTRVSLRTKIFREVVANLIVHRE 297

Query: 279 YFSSGHIQVDIFQDKLEISNPG-----GLVLGLSYSELGKRSIPRNPLLADLMLRSKLVE 333
           Y ++    + I++D++   N       GL++   +S       P+NP +A   ++   V+
Sbjct: 298 YTNALPATLVIYRDRVITENANRPQHHGLLVPGQFS-----PFPKNPTIAKFFIQLGRVD 352

Query: 334 RVGSGIIRIRESMESY--GLNCEFNVSENY-----------FSTVLGRKKGFKFPVSFSS 380
            +GSG+  +   +  Y  G    F+  + +             +V G  +G    +   +
Sbjct: 353 ELGSGVRNVHLFLPLYSPGRVPTFDDGDVFRIEIPLDHAMAEGSVHGVSEGL---LGEHN 409

Query: 381 TNAVSRSDKIIALIMENPEITILEISKLLNLSHSTVRNEIKVLKENGIVKRVGPTKGGHW 440
                R  K++  ++E+P+ T   I++ + +S  T + ++KVL++  ++  VGP K GH+
Sbjct: 410 VKVSERIAKVLDFVLEHPQATTAVIAEFIGVSEKTAKRDLKVLRDRKLIHFVGPPKSGHY 469