Pairwise Alignments

Query, 447 a.a., putative DNA binding domain-containing protein from Methanococcus maripaludis S2

Subject, 466 a.a., Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  145 bits (366), Expect = 3e-39
 Identities = 143/474 (30%), Positives = 228/474 (48%), Gaps = 59/474 (12%)

Query: 11  DLINTGEGYTLEFKESL--NASLAKEICAFANSDGGHILLGVTDSGDITGYP---LSNQD 65
           D I  GE  TLE KESL  N S+AK I AF+N+ GG +++GV D   I G     L    
Sbjct: 5   DQIQKGESKTLELKESLPKNESIAKTIVAFSNTSGGKLIIGVNDQLSIVGIDDSMLFEIQ 64

Query: 66  DARITDIARNMDPS-----FSVNLEKVDNVVVITVPKGENKPY---STGGLY--YVRNGS 115
           D   + I+ +  P      +SVN+E    V+VI V +G  KPY   S G     YVR G+
Sbjct: 65  DKIASIISDSCFPGIIPDIYSVNIEN-KLVLVIEVVRGNQKPYFLKSRGREVGSYVRIGA 123

Query: 116 QSQKLKREEVIELFKYNGLISFEEIPNKEFDLKKDLNNSALNNFITASGITNKLKKEDLL 175
            ++      + EL +    IS++E    + +L K L+ S L +     G  N L  E L 
Sbjct: 124 TNRLADSSTIAELERQKHHISYDEEVYYDLELNK-LDLSPLIDIFKQVG--NPLNNEKL- 179

Query: 176 NNLYLLKDG----FLKNA-----GVLYFCNNSTKFFRNAHITCVLYEGTSKSNILDRKDF 226
            NL L+K      +  NA     G L  C           I C  ++GT+    +D+K++
Sbjct: 180 ENLKLIKTSNDKIYPSNALMVILGKLPHCT----------IKCARFKGTTMETFIDKKEY 229

Query: 227 SKDIYSNFNDSFDYICSKLNTEYII-GKERVERLELPKEAIREALVNSIAHRDYFSSGH- 284
           S DI++   ++ +++ + +N +  I G  R E+ E+P  A+REALV +I HRDY + G  
Sbjct: 230 SGDIFTALENTQNFVLNHINLQAEIKGLYRDEKYEIPVVALREALVKAIIHRDYVNQGRD 289

Query: 285 IQVDIFQDKLEISNPGGLVLGLSYSEL-GKRSIPRNPLLADLMLRSKLVERVGSGIIRIR 343
           I+V I+ D + I +PG L   ++  ++   RS  RN +LA++     L+E+ GSGI RI 
Sbjct: 290 IKVGIYDDIVNIVSPGSLPNNITMDDIFNGRSEVRNRVLANVFKELGLIEQWGSGINRII 349

Query: 344 ESMESYGLNCEFNVSEN-YFSTVLGR-------KKGFKFPVSF--------SSTNAVSRS 387
            + + YGL       +N YF     R       K+  +   S         + TN +   
Sbjct: 350 SACKGYGLQTPIIQEKNDYFDNEFIRPQETSSLKESIEQDQSIRQDHERLRTITNDLEEE 409

Query: 388 DKIIAL-IMENPEITILEISKLLNLSHSTVRNEIKVLKENGIVKRVGPTKGGHW 440
            + I L ++E  +I+  E + LL+L ++     +  +    ++K+ G  +  ++
Sbjct: 410 KRTILLYLLEKGKISRKEATALLDLKNTKTYEILTEMVAQNLIKKQGKGRATYY 463