Pairwise Alignments

Query, 447 a.a., putative DNA binding domain-containing protein from Methanococcus maripaludis S2

Subject, 469 a.a., Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  151 bits (382), Expect = 4e-41
 Identities = 141/472 (29%), Positives = 233/472 (49%), Gaps = 52/472 (11%)

Query: 11  DLINTGEGYTLEFKESL--NASLAKEICAFANSDGGHILLGVTDSGDITGYP---LSNQD 65
           D I  GE  TLE KESL  N S+AK I AF+N+ GG +++GV D   I G     L    
Sbjct: 5   DQIQKGESKTLELKESLPKNESIAKTIVAFSNTSGGKLIIGVNDQLSIVGIDDSMLFEIQ 64

Query: 66  DARITDIARNMDPS-----FSVNLEKVDNVVVITVPKGENKPY---STGGLY--YVRNGS 115
           D   + I+ +  P      +SVN+E    V+VI V +G  KPY   S G     YVR G+
Sbjct: 65  DKIASIISDSCFPGIIPDIYSVNIEN-KLVLVIEVVRGNQKPYFLKSRGREVGSYVRIGA 123

Query: 116 QSQKLKREEVIELFKYNGLISFEEIPNKEFDLKKDLNNSALNNFITASGITNKLKKEDLL 175
            ++      + EL +    IS++E    + +L +   +  L+ F      T K   ++ L
Sbjct: 124 TNRLADSSTIAELERQKHHISYDEEVYHDLELNRLDMSPLLDKFKQ----TGKTVTKEKL 179

Query: 176 NNLYLLKDGFLKNAGVLYFCNNSTKF----FRNAHITCVLYEGTSKSNILDRKDFSKDIY 231
            NL L+K    KN     + +N+       F +  I C  ++GT+    +D+K++S DI+
Sbjct: 180 ENLKLIKTINDKN-----YPSNALMIILGKFPHCTIKCARFKGTTMETFIDKKEYSGDIF 234

Query: 232 SNFNDSFDYICSKLNTEYII-GKERVERLELPKEAIREALVNSIAHRDYFSSGH-IQVDI 289
           +   ++ +++ + +N +  I G  R E+ E+P  A+REALVN+I HRDY + G  I+V I
Sbjct: 235 TVLENAQNFVLNHINLQAEIKGLYRDEKYEIPVVALREALVNAIIHRDYVNQGRDIKVGI 294

Query: 290 FQDKLEISNPGGLVLGLSYSEL-GKRSIPRNPLLADLMLRSKLVERVGSGIIRIRESMES 348
           + D + I +PG L   ++  ++   RS  RN +LA++     L+E+ GSGI RI  + +S
Sbjct: 295 YDDIVNIVSPGSLPNNITMDDIFNGRSEVRNRVLANVFKELGLIEQWGSGINRIINTCKS 354

Query: 349 YGLNCEFNVSEN-YFSTVLGR-------KKGFKFPVSF--------SSTNAVSRSDK--- 389
           YGL       +N YF     R       K+  +   S         + TN   R +K   
Sbjct: 355 YGLQSPIIQEKNDYFDIEFIRPQITASSKESIEQDQSTKPDHERLRTITNDYERLEKEKQ 414

Query: 390 -IIALIMENPEITILEISKLLNLSHSTVRNEIKVLKENGIVKRVGPTKGGHW 440
            I+  ++E  +I+  E + LL+L ++     +  + +  ++K+ G  +  ++
Sbjct: 415 TILLYLLEKGKISRKEATILLDLKNTKTYEILTEMVDQDLIKKQGKGRATYY 466