Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 613 a.a., ATP-dependent RNA helicase from Rhodanobacter sp. FW510-T8

 Score =  345 bits (886), Expect = 2e-99
 Identities = 189/465 (40%), Positives = 284/465 (61%), Gaps = 10/465 (2%)

Query: 4   FKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
           F  LGL   +L AL   G+ +P+PIQ   IP L+EG RD++GQAQTGTGKTAAF +PIL 
Sbjct: 15  FTALGLDPNVLRALADVGYESPSPIQAATIPPLMEG-RDVLGQAQTGTGKTAAFALPILS 73

Query: 64  TIDEHSRNTQALILAPTRELAIQVAEEIDSIKGS-KRLNVFPVYGGQSIDRQIRELRRGV 122
            +D      QAL+LAPTRELAIQVAE           L V P+YGGQS   Q+  L+RGV
Sbjct: 74  RLDLKPGKPQALVLAPTRELAIQVAEAFQRYATYLPGLQVLPIYGGQSYGPQLHSLKRGV 133

Query: 123 QIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRMLLF 182
            +VVGTPGR++DH+ +RT+ L  + Y+VLDEADEML MGFIDDVE++L++    +++ LF
Sbjct: 134 HVVVGTPGRVIDHLDKRTLDLSELKYLVLDEADEMLRMGFIDDVEKVLQATPPGRQVALF 193

Query: 183 SATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTEKEF 242
           SAT+P  I K+A+ +++E   + +K    T     Q ++ +    K + ++RI++ E   
Sbjct: 194 SATMPAPIRKIAQRHLKEPVEVTIKSSTTTAANIHQRYWFVSGMHKLDAMTRILEAEPFD 253

Query: 243 YGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATDVAA 302
             +IF +TK   +E+A +L  +G AA  ++GD+ Q QRE+ + + K  K+++LVATDVAA
Sbjct: 254 AMIIFARTKQATEELAGKLQARGLAAAAINGDIAQPQRERVIQQLKDGKLDILVATDVAA 313

Query: 303 RGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQKIAKT 362
           RG+D+  ++HV+N+DIP + ESYVHRIGRTGRAG+ G AI FV P E      I++  + 
Sbjct: 314 RGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVSPRERGMLHAIERATRQ 373

Query: 363 EIKREEVPDVKDIISAKKIKIISGIKEVLESGKYADCEKMASDLLED--ADPQEVLSAVL 420
            I++ ++P V+ +   +  K    I ++L  G     +++     ++      E+ +A+ 
Sbjct: 374 PIEQMQLPSVEVVNDVRIGKFKQRISDMLAQGDLGQFQQLIEQYEQEHNVPAVEIAAALA 433

Query: 421 KYALKDE---LSESNYKKIGRGSQRSERSGRNDSRGRRSFAPGEN 462
           + A  D+   L+    ++    + R  +    DS  R   AP E+
Sbjct: 434 RIAQGDQPLLLAPPPKREKHEAATREHKPRERDSASR---APREH 475