Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 459 a.a., ATP-dependent RNA helicase DbpA from Rhodanobacter sp000427505 FW510-R12

 Score =  275 bits (704), Expect = 2e-78
 Identities = 140/359 (38%), Positives = 224/359 (62%), Gaps = 2/359 (0%)

Query: 1   MESFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
           M +F  L L   +L +++  G+   TP+Q Q++P +++G RD++ QAQTG+GKTAAFG+ 
Sbjct: 1   MPTFSTLPLKPALLASVDTLGYAEMTPVQAQSLPPMLQG-RDVIAQAQTGSGKTAAFGLS 59

Query: 61  ILETIDEHSRNTQALILAPTRELAIQVAEEIDSIKGS-KRLNVFPVYGGQSIDRQIRELR 119
           +L+ +D  +   QAL+L PTRELA QV++ I  +  +   + +  + GG  +  Q+  L 
Sbjct: 60  LLQALDADTIRLQALVLCPTRELADQVSKAIRKLAANIPNVKLLTLCGGMPLGPQLASLS 119

Query: 120 RGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRM 179
               IVVGTPGR+ +H+ R ++    +  +VLDEAD ML+MGF + +++I+  ++   + 
Sbjct: 120 HDPHIVVGTPGRVQEHLKRGSLHGGGIKVLVLDEADRMLDMGFSEAIDDIIGRIAKHHQT 179

Query: 180 LLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTE 239
           LLFSAT PD I   ++   ++  ++ V+      +  +Q F E+    K + L++++  E
Sbjct: 180 LLFSATYPDEIRAASQRVQKDPVVVTVEAPAARRSAIEQQFIEVEPAQKLDALAQLLAGE 239

Query: 240 KEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATD 299
           +  + L+FC  + DVD VA  L+ +GY+A  LHGDM Q  R++ L +F  +  NVLVATD
Sbjct: 240 RGQHALVFCNMRRDVDAVAQELDRRGYSALALHGDMEQRDRDEVLVRFANRSCNVLVATD 299

Query: 300 VAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQK 358
           VAARG+DI  L  V+++D+  +P+++ HRIGRTGRAG+ G AIT   P E  K   I++
Sbjct: 300 VAARGLDIAALPLVLSYDVAHDPDTHTHRIGRTGRAGETGLAITLCTPRERPKAANIEE 358



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 465 LFVALGKLDKMNPKKLVDHISRKSDVKGRDIDDVKVFEKFSFVTVSSSDAEIILDSFKNE 524
           L +  G+ DK+ P  ++  ++  + ++ +DI  + VF   ++V +S + A   L+  +  
Sbjct: 387 LVIDAGRQDKLRPGDILGALTGDAGLEAKDIGKIDVFATRAYVAISRALANKALERLRAG 446

Query: 525 R-RGR 528
           R +GR
Sbjct: 447 RIKGR 451