Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 570 a.a., ATP-dependent RNA helicase RhlE from Xanthobacter sp. DMC5

 Score =  294 bits (753), Expect = 5e-84
 Identities = 153/369 (41%), Positives = 234/369 (63%), Gaps = 6/369 (1%)

Query: 1   MESFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
           + SF +LGL++ I+ AL +     PTPIQ +AIP ++ G RD++G AQTGTGKTAAF +P
Sbjct: 25  LTSFSSLGLAEPIVRALTEANHVTPTPIQAEAIPQVLAG-RDLIGIAQTGTGKTAAFALP 83

Query: 61  ILETIDEHSR-----NTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQI 115
           IL+ +  H R     + +AL+L+PTREL+ Q+ +  +      R++V    GG  + RQI
Sbjct: 84  ILDRLVRHPRRPDPKSVRALVLSPTRELSGQIVDNFEKFGRHARISVTLAIGGVPMGRQI 143

Query: 116 RELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVST 175
           R L RGV ++V TPGR++D +    +KL+ V  +VLDEAD+ML+MGF+  +  I++ +  
Sbjct: 144 RALARGVDVLVATPGRLMDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIVRRLPH 203

Query: 176 DKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRI 235
            +  L FSAT+P +I +LA   + +   + V     T    +Q    +   +K +LL+ +
Sbjct: 204 KRHSLFFSATMPPAIAELAGGMLHDPVRVAVTPVAKTADRVEQRVIHVDKPNKGQLLAEV 263

Query: 236 IDTEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVL 295
           + TE+    L+F +TK   D+V   L + G AAE +HG+ +Q QR++ L  F+  KI  L
Sbjct: 264 LSTEEIDRALVFARTKHGADKVVRVLAKCGIAAEAIHGNKSQNQRDRVLLAFREGKIRTL 323

Query: 296 VATDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKY 355
           +ATD+AARGID+  ++HV+N+D+P  PESYVHRIGRT RAG++G AI+F +  E    K 
Sbjct: 324 IATDIAARGIDVTGVSHVINYDLPNVPESYVHRIGRTARAGREGIAISFCDHEERAYLKS 383

Query: 356 IQKIAKTEI 364
           I+++ K +I
Sbjct: 384 IERLIKLQI 392