Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 458 a.a., ATP-dependent RNA helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  289 bits (740), Expect = 1e-82
 Identities = 146/363 (40%), Positives = 239/363 (65%), Gaps = 9/363 (2%)

Query: 1   MESFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
           M +FK+L LS  +L++L    +T+PTPIQEQAIP+L++G  D+ GQA+TG+GKTAAFG+P
Sbjct: 1   MATFKDLNLSAALLQSLHDLHYTSPTPIQEQAIPLLLQGL-DVAGQAETGSGKTAAFGLP 59

Query: 61  ILETIDEHSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSIDRQIRELR 119
           +L+ I    +  QAL++ PTRELA+QV +E+    +    L +   YGG S   +   L 
Sbjct: 60  LLQRIKPELQQVQALVVVPTRELAVQVRQELKQYARHIPNLKISAFYGGHSFRMEEASLE 119

Query: 120 RGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRM 179
              Q++VGTPGR+ DH+SR+T++L N + VVLDEAD++L MGF ++++E+L+++  +++ 
Sbjct: 120 HPPQVLVGTPGRLTDHLSRKTLRLSNTAQVVLDEADKLLEMGFEEELDELLRALPRNRQT 179

Query: 180 LLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFY---EIHSRDKFELLSRII 236
           +LFSAT+ D + +L  N +++   +    Q   T L D+  Y   ++    K + L++++
Sbjct: 180 VLFSATMADDVKQLIANSLKDPKFV----QATATALPDRITYYGVQVQDEQKKQALAQLL 235

Query: 237 DTEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLV 296
            +      ++F   +   +E+A+ L + G+AA  LHG + Q +R+KT+  F+    +VLV
Sbjct: 236 QSIDAAGTVVFVNARLTTEEIADYLQQYGFAARALHGKLDQMERDKTMTLFRNGTTSVLV 295

Query: 297 ATDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYI 356
           ATD+AARG+DI+ L  +V++++PQ+ ++Y+HR GRTGRAGK G   TFV   E +K +  
Sbjct: 296 ATDLAARGLDIDVLQQIVHYELPQHEDAYLHRSGRTGRAGKSGTVYTFVNSREAQKLEQW 355

Query: 357 QKI 359
           Q++
Sbjct: 356 QEV 358



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 1/66 (1%)

Query: 465 LFVALGKLDKMNPKKLVDHISRKSDVKGRDIDDVKVFEKFSFVTVSSSDAEIILDSFKNE 524
           L ++ G+ DK++P+ +V  +  +  +   DI  +++ ++ SFV V    A   +    + 
Sbjct: 386 LHISGGRKDKLSPRDIVGALIAEVGLAATDIGKIEIQDRHSFVAVPEGAASRAVRKLNDA 445

Query: 525 R-RGRR 529
           + +GRR
Sbjct: 446 KIKGRR 451