Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 563 a.a., ATP-dependent helicase from Magnetospirillum magneticum AMB-1

 Score =  301 bits (770), Expect = 6e-86
 Identities = 200/544 (36%), Positives = 290/544 (53%), Gaps = 27/544 (4%)

Query: 3   SFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
           +F++LGL  EIL+AL + G+T+PTPIQ QAIP+++ G RD++G AQTGTGKTA+F +P++
Sbjct: 19  TFEDLGLGPEILKALAESGYTHPTPIQAQAIPVVLMG-RDVLGCAQTGTGKTASFTLPMI 77

Query: 63  ETIDE---HSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIRELR 119
           E +      +R  ++LILAPTRELA QVAE  D       L    + GG+S+  Q+  L 
Sbjct: 78  EILAAGRAKARMPRSLILAPTRELAAQVAENFDKYGKYHPLKKALIIGGESMSDQVALLD 137

Query: 120 RGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRM 179
           RGV +++ TPGR+LD   R  I L +V  +V+DEAD ML+MGFI DVE+I+  +   ++ 
Sbjct: 138 RGVDVLIATPGRLLDMFERGRILLNDVKVLVIDEADRMLDMGFIPDVEKIVGLLPKIRQT 197

Query: 180 LLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTE 239
           L FSAT+   I +LA  ++     +KV       T   Q+   +   DK E L  +I  E
Sbjct: 198 LFFSATMGPEIRRLADAFLMNPKEVKVSTGASAATTVVQALAVVEEIDKRETLRHLIRIE 257

Query: 240 KEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATD 299
           +     IFC  K DVD +   L + G+    LHGDM Q+ R +TL+KFK  +  ++V +D
Sbjct: 258 EVKNAFIFCNRKRDVDVLFRSLKKHGFDVVQLHGDMAQSARGETLEKFKKGEARLMVCSD 317

Query: 300 VAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYIQKI 359
           VAARGIDI+ ++HV NFD+P + E YVHRIGRTGRAG +G+A T   P + R    I+ +
Sbjct: 318 VAARGIDISAVSHVFNFDVPIHAEDYVHRIGRTGRAGMEGHAFTIASPDDGRFVGAIEAM 377

Query: 360 AKTEIKR---EEVPDVKDIISAKKIKIISGI-KEVLESGKYADCE-------KMASDLLE 408
             T I R   E VP +   ++A+K +   G  K+     +  D E       +   D   
Sbjct: 378 IGTTIPRISVEGVPALDLDMTARKGRGGRGAPKDAKRPARGKDDEAKPRRERRPRRDEAP 437

Query: 409 DADPQEVLSAVLKYALKDELSESNYKKIGRGSQRSE------------RSGRNDSRGRRS 456
            A+   V +A  +  ++    E   +  GRG  R E            R GRN   GRR 
Sbjct: 438 VAEAAPVEAAAPEEVIERPREERPERSRGRGRDREEPRRDEPRREEPRRGGRNRDEGRRD 497

Query: 457 FAPGENVRLFVALGKLDKMNPKKLVDHISRKSDVKGRDIDDVKVFEKFSFVTVSSSDAEI 516
              G        LG  + ++P  ++       D     +       K +    S +DA++
Sbjct: 498 ERGGRRRGRIDELGIGEMLHPDGVIGFGDHMPDFIAAAVPLPVKTSKSTVDDDSDADADL 557

Query: 517 ILDS 520
             DS
Sbjct: 558 DADS 561