Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 452 a.a., ATP-dependent RNA helicase RhlE from Dickeya dianthicola ME23

 Score =  299 bits (766), Expect = 1e-85
 Identities = 161/373 (43%), Positives = 234/373 (62%), Gaps = 7/373 (1%)

Query: 3   SFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
           SF++LGLS +IL A+E++G+  PTP+Q QAIP+++EG RD++  AQTGTGKTA F +P+L
Sbjct: 2   SFESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEG-RDLMASAQTGTGKTAGFTLPLL 60

Query: 63  ETIDEHS------RNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGGQSIDRQIR 116
           + + +        R  +ALIL PTRELA Q+ E + +     RL    V+GG SI+ Q+ 
Sbjct: 61  QLLSQRPSQAKGRRPVRALILTPTRELAAQIGENVLAYSQYLRLRSLVVFGGVSINPQMM 120

Query: 117 ELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTD 176
           +LR GV I++ TPGR+LD   +  + L  V  +VLDEAD ML+MGFI D+  +L  + + 
Sbjct: 121 KLRSGVDILIATPGRLLDLEHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLPSK 180

Query: 177 KRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRII 236
           ++ LLFSAT  D I +LA   +     ++V R+   + L  Q  + +  + K ELLS +I
Sbjct: 181 RQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHYVDKKRKRELLSHLI 240

Query: 237 DTEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLV 296
                   L+F +TK   + +A +LN+ G  A  +HG+ +Q  R + L  FK   I VLV
Sbjct: 241 GKHDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGDIRVLV 300

Query: 297 ATDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVEPSEFRKFKYI 356
           ATD+AARG+DI+ L HVVN+++P  PE YVHRIGRTGRA   G A++ V   E +  + I
Sbjct: 301 ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEALSLVCVDEHKLLRDI 360

Query: 357 QKIAKTEIKREEV 369
           +++ K EI R E+
Sbjct: 361 ERLLKREIPRMEI 373