Pairwise Alignments

Query, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 567 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  414 bits (1065), Expect = e-120
 Identities = 231/560 (41%), Positives = 345/560 (61%), Gaps = 29/560 (5%)

Query: 4   FKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
           F +LG+S EIL+A+E  G+T P+ IQ Q+IP+++EG  D++GQAQTGTGKTA+FGIPI++
Sbjct: 7   FADLGISAEILQAVEGMGYTQPSEIQAQSIPLMLEG-HDVIGQAQTGTGKTASFGIPIVD 65

Query: 64  TIDEHSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSIDRQIRELRRGV 122
            +D  S+  QALIL PTRELA+QV  EI  + K  K +    +YGG++IDRQIR L+RGV
Sbjct: 66  RVDSSSKQPQALILCPTRELAVQVEGEITKLAKYKKGIFSTAIYGGEAIDRQIRTLKRGV 125

Query: 123 QIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDDVEEILKSVSTDKRMLLF 182
           QIVVGTPGR++DH++R T+KL+ V  +VLDEADEML+MGF +D+E +L  +  D++ + F
Sbjct: 126 QIVVGTPGRVMDHMNRGTLKLDTVKTIVLDEADEMLDMGFREDIETVLSQMPEDRQTIFF 185

Query: 183 SATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRIIDTEKEF 242
           SAT+   IM L + Y    +I+K++R++LT     Q +YE+    K EL++R+I+  +  
Sbjct: 186 SATMAKPIMDLTRKYQTNPEIVKIQRKELTVENISQVYYEVKPPLKMELITRLINIHQFN 245

Query: 243 YGLIFCKTKADVDEVANRLNEKGYAAEGLHGDMTQAQREKTLDKFKGKKINVLVATDVAA 302
            G++FC TK   DEV   L  +G  AE LHGD++QAQR+K ++KF+     VLVATDVAA
Sbjct: 246 LGVVFCNTKRATDEVTEGLIARGIMAEALHGDLSQAQRDKVMNKFRKGHCTVLVATDVAA 305

Query: 303 RGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAITFVE-PSEFRKFKYIQKIAK 361
           RGID++++  V N+D+P + E YVHRIGRTGRAG+ G AI+F+    +  + K +++  K
Sbjct: 306 RGIDVDNVEVVFNYDLPLDEEYYVHRIGRTGRAGRSGMAISFITGRKDIFRLKDLERYIK 365

Query: 362 TEIKREEVPDVKDIISAKKIKIISGIKEVL--ESGKYADCEKMASDLLEDADPQEVLSAV 419
           T + +   P V ++I  KK +++  +   L  E         +   L E     ++   +
Sbjct: 366 TTLTKMNPPSVAEMIDQKKDQLVKEVTTSLSKEEDNQVFEAALGQMLAEGLSMDQIALGL 425

Query: 420 LKYALK---DELSESNYK-KIGRGSQRSERSGRNDSRGRRSFAPGEN------------- 462
           +K  +     ELS+ N+   +GR   R ER GR   R  R    G               
Sbjct: 426 VKLQMGKSIQELSDMNFDLNLGRDRDRGERGGRGRDRFERGGRKGRGDRPAGRKGGRERG 485

Query: 463 ------VRLFVALGKLDKMNPKKLVDHISRKSDVKGRDIDDVKVFEKFSFVTVSSSDAEI 516
                  RLF+ LGK D++ P  +V  I+ ++ + GR I  + +F+ FSFV V S DA  
Sbjct: 486 RREANMSRLFLNLGKKDRIRPNDIVGAIAGEAGISGRLIGGIDIFDNFSFVDVPSKDASH 545

Query: 517 ILDSFK-NERRGRRSIIEVA 535
           +++  K N  +G+   +E++
Sbjct: 546 VINVMKRNTIKGKPVNMELS 565