Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 337 a.a., Integron integrase IntI1 from Sphingobium sp. HT1-2

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 46/200 (23%), Positives = 77/200 (38%), Gaps = 46/200 (23%)

Query: 10  LTKDELKLFIDTVDSKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENF 69
           LT DE+   +  ++  EH+LF ++LYG  +R+SE L + VK+++ + G   + + K    
Sbjct: 117 LTPDEVVRILGFLEG-EHRLFAQLLYGTGMRISEGLQLRVKDLDFDHGTIIVREGKGSKD 175

Query: 70  QICVIPE----------------WLNEDIFGHIVDNNLKDDDRLFKFKNRTYAWELV--- 110
           +  ++PE                WL +   G          +R +     ++ W  V   
Sbjct: 176 RALMLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQ 235

Query: 111 --------------------------KKYTKDAKIHKEFSTHTFRRSRALHLLNDGVPLE 144
                                     K+  + A I K  + HT R S A  LL  G  + 
Sbjct: 236 HTHSTDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIR 295

Query: 145 KVSKYLRHKSINTTMHYLKI 164
            V   L H  ++TTM Y  +
Sbjct: 296 TVQDLLGHSDVSTTMIYTHV 315