Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 292 a.a., integrase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 20/167 (11%)

Query: 18  FIDTVDSKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICVIPEW 77
           F DT + +  +L  + LYG  +R++EL+ IE  +I       ++L    +     ++P  
Sbjct: 122 FEDTFEGQRDRLTLEFLYGTGIRLAELINIEPSDIEERAKTVRVLGKGNKER---IVP-- 176

Query: 78  LNEDIF----------GHIVDNNLKDDDRLFKFKNRT----YAWELVKKYTKDAKIHKEF 123
           LN+ +            H + +N      L   K R     + + +VKKY       +  
Sbjct: 177 LNDSLLLALDAYKTEKSHFLGDN-NSVKLLVTNKGRPLYPKFVYRVVKKYISLITTSEHN 235

Query: 124 STHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIK 170
           S H  R S A HLLN G  L  +   L H S+  T  Y   T++ +K
Sbjct: 236 SPHVLRHSFATHLLNKGADLNAIKDLLGHASLAATQVYTHNTIEQLK 282