Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 362 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 12/148 (8%)

Query: 31  FKMLYGMALRVSELLT-IEVKNINLNEGVCKLLDTKTENFQICVIPEWLNEDIFGHIVDN 89
           F    G+ L   E LT  E+       G   L+  +T+  +  VIP  L++     +   
Sbjct: 210 FSCYTGLRLSDVESLTWAEIVPTAGKHGQFTLIKEQTKTGETVVIP--LSKQAMSILQRQ 267

Query: 90  NLKDDDR-----LFKFKNRTYAWELVKKYTKDAKIHKEFSTHTFRRSRALHLLNDGVPLE 144
           NL+  D      +FK K+RT     + ++   + I+  F+ H+ R +    L   GV + 
Sbjct: 268 NLETKDTRAHDLVFKLKSRTQTKRYIHRWRTQSGIY--FTYHSSRHTFGTMLQTAGVDIN 325

Query: 145 KVSKYLRHKSINTTMHYLKITVDDIKKE 172
             SK + HKSI+ T+ Y K+   D +KE
Sbjct: 326 TTSKLMGHKSISMTLRYAKVV--DSRKE 351