Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 300 a.a., Tyrosine recombinase XerC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 44.3 bits (103), Expect = 2e-09
 Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 18/146 (12%)

Query: 28  KLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICV-------IPEWLNE 80
           +   +++YG  LR+SEL+ +++K+++L+ G   ++   ++  ++ +       I  WL  
Sbjct: 138 RAMLEVMYGAGLRLSELVGLDIKHLDLDTGEVWVMGKGSKERRLPIGRNAVTWIEHWL-- 195

Query: 81  DIFGHIVDNNLKDDDRLF--KFKNRTYAWELVKKYTK---DAKIHKEFSTHTFRRSRALH 135
           D+ G        D++ LF  K   R  A  + K++ +      ++     H  R S A H
Sbjct: 196 DLRGLFA----SDEEALFLSKLGKRISARNVQKRFAEWGIKQGLNSHVHPHKLRHSFATH 251

Query: 136 LLNDGVPLEKVSKYLRHKSINTTMHY 161
           +L     L  V + L H +++TT  Y
Sbjct: 252 MLESSGDLRGVQELLGHANLSTTQIY 277