Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 295 a.a., tyrosine recombinase XerD from Kangiella aquimarina DSM 16071

 Score = 69.3 bits (168), Expect = 6e-17
 Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)

Query: 19  IDTVDSKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICVIPEWL 78
           +DT      K   ++LY   LR++EL+++E+  I   +GV +++  K    +I  I E  
Sbjct: 125 LDTALGLRDKAMLELLYSSGLRITELISVEMNQIGFQQGVMRVIG-KGNKERIVPIGEEA 183

Query: 79  NEDI-----FGHIVDNNLKDDDRLF------KFKNRTYAWELVKKYTKDAKIHKEFSTHT 127
            + I     +G    +  K  D LF      +   +T+ W  +K Y K A I K  S HT
Sbjct: 184 LQAIAHYIRYGRAELSKEKVTDWLFLSTRGQRMTRQTF-WHRIKFYAKTAGIRKHLSPHT 242

Query: 128 FRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKK 171
            R + A HLLN G  L  +   L H  ++TT  Y  +  + +K+
Sbjct: 243 LRHAFATHLLNHGADLRTLQMLLGHSDLSTTQIYTYVAKERLKQ 286