Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 321 a.a., integron integrase from Kangiella aquimarina DSM 16071

 Score = 58.2 bits (139), Expect = 1e-13
 Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 46/192 (23%)

Query: 19  IDTVDSKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICVIPEWL 78
           I +V + E+K+   +LYG  +R+SE L++ +K+I+       +  +K E  ++ ++ +  
Sbjct: 115 IFSVLTGEYKVIASLLYGSGMRISEALSLRIKDIDFTRSTVTVRQSKGEKDRVTILSKLS 174

Query: 79  NEDIFGHIVDNNLKDDDRLF---------------KFKN--RTYAWELV----------- 110
            + +  H     +  D                   K+ N  R++ W+ V           
Sbjct: 175 AQLLSDHFSQLKINYDSLKLDSDWPGVHLPNALGKKYPNAYRSWGWQFVFPSSTNPPDLI 234

Query: 111 ------------------KKYTKDAKIHKEFSTHTFRRSRALHLLNDGVPLEKVSKYLRH 152
                              +  K AKI K  S+H FR S A HLL  G  +  V + L H
Sbjct: 235 TGVRRGFHRHPRTIGRVLNRAFKQAKITKHASSHAFRHSFATHLLEAGYDIRTVQELLGH 294

Query: 153 KSINTTMHYLKI 164
           KS+ TT  Y  +
Sbjct: 295 KSVETTQIYTHV 306