Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 300 a.a., tyrosine recombinase XerC from Enterobacter asburiae PDN3

 Score = 46.6 bits (109), Expect = 4e-10
 Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 20/147 (13%)

Query: 28  KLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICV-------IPEWLN- 79
           +   +++YG  LR+SEL+ +++K+++L  G   ++   ++  ++ +       I  WL+ 
Sbjct: 138 RAMLEVMYGAGLRLSELVNLDIKHLDLESGEVWVMGKGSKERRLPIGRNAVSWIEHWLDL 197

Query: 80  EDIFGHIVDNNLKDDDRLF--KFKNRTYAWELVKKYTK---DAKIHKEFSTHTFRRSRAL 134
             +FG        ++D LF  K   R  A  + K++ +      ++     H  R S A 
Sbjct: 198 RGLFG-------SEEDALFLSKLGKRISARNVQKRFAEWGIKQGLNSHVHPHKLRHSFAT 250

Query: 135 HLLNDGVPLEKVSKYLRHKSINTTMHY 161
           H+L     L  V + L H +++TT  Y
Sbjct: 251 HMLESSGDLRGVQELLGHANLSTTQIY 277