Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Dickeya dianthicola ME23

 Score = 55.8 bits (133), Expect = 7e-13
 Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 14/155 (9%)

Query: 28  KLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICVIPE---WLNEDIF- 83
           K   ++LY   LRVSEL+ + + +++L +GV +++    +   + +  E   WL + +  
Sbjct: 137 KAMLELLYATGLRVSELVGLTISDVSLRQGVVRVIGKGNKERLVPLGEEAVYWLEQYLEY 196

Query: 84  -------GHIVDNNLKDDDRLFKFKNRTYAWELVKKYTKDAKIHK-EFSTHTFRRSRALH 135
                  G  +D  L   +R  +   +T+ W  +K Y   A I   + S H  R + A H
Sbjct: 197 SRPWLLNGQTLDV-LFPSNRAQQMTRQTF-WHRIKHYATLASIDSNKLSPHVLRHAFATH 254

Query: 136 LLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIK 170
           LLN G  L  V   L H  ++TT  Y  +  + ++
Sbjct: 255 LLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLR 289