Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 369 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 56.6 bits (135), Expect = 5e-13
 Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 12/170 (7%)

Query: 10  LTKDELKLFIDTVDSKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENF 69
           L+K+E+K  ++   + +H+    ++Y   LR SE+L +++ +++   G+  +  +K +  
Sbjct: 196 LSKEEVKRILEAHKNIKHRTMLSIIYACGLRRSEVLHLKISDVDSKRGLLIVRQSKGKKD 255

Query: 70  QICVIPEWLNEDIFGHIVDNNLKDDDRLFKFK----NRTYAWELVKKYTKDAK----IHK 121
           +  V+P  L++     + +    +  + F F     N  Y+   ++K  K A     I K
Sbjct: 256 R--VVP--LSDKTIALLREYYKYERPQYFLFXGKKLNSKYSSGSLQKILKSALGKSGIKK 311

Query: 122 EFSTHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKK 171
             + H  R S A HLL +G  L  + + L H S  TT  Y  +T + I+K
Sbjct: 312 PVTLHWLRHSFATHLLENGTDLRYIQEILGHNSSRTTEIYTHVTDNSIRK 361