Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 301 a.a., tyrosine recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 55.5 bits (132), Expect = 9e-13
 Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 10/165 (6%)

Query: 19  IDTVDSKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICVIPEWL 78
           + T +   ++   ++LY   LRVSEL+ +++  +  + G  ++L    +   + V  + L
Sbjct: 130 LGTPEGHRNRAMLEVLYSSGLRVSELVELKLGMVYSDIGFLRILGKGNKERLVPVGKDAL 189

Query: 79  NE-DIFGHIVDNNLK----DDDRLF-----KFKNRTYAWELVKKYTKDAKIHKEFSTHTF 128
               ++   V N+ K     ++ +F     K   R   +  +KK  ++  I K+ S HTF
Sbjct: 190 RYLKLYLDEVRNHQKIAPGHEEYVFLNRRGKKMTRVMVFIFIKKLVEEVGIKKKVSPHTF 249

Query: 129 RRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKKEL 173
           R S A HL+  G  L  V + L H+SI TT  Y  +  + +++ L
Sbjct: 250 RHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDREYLRQVL 294