Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 422 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 17/183 (9%)

Query: 11  TKDELKLFIDTVD-----SKEHKLFFKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTK 65
           +K+E++  I +VD      K +     +   + LR S++  ++ KN++ N    ++   K
Sbjct: 223 SKEEVEKLIASVDRSSPTGKRNYAIIMLAARLGLRASDISRLKFKNLHWNTSTIEIDQVK 282

Query: 66  TEN-FQICVIPEWLNEDIFGHIVDNNLKDDDRLFK--------FKNRTYAWELVKKYTKD 116
           T N  Q+ ++P+  N  I        + ++  +F         F        +V++    
Sbjct: 283 TGNPLQLPLLPDVGNAIIDYLQYGRPVSEEPHVFLTGRPPYGCFTTSNVVTHVVQRAIIK 342

Query: 117 AKI---HKEFSTHTFRRSRALHLLNDGVPLEKVSKYLRHKSINTTMHYLKITVDDIKKEL 173
           A I   ++ F  H+ R S    +L     L  +S+   HKS  +T  YL+I +  +K+ +
Sbjct: 343 AGIDTKNRRFGPHSLRHSLGFRMLEKSTMLPVISEVFGHKSSESTRFYLRIDLTSMKQCM 402

Query: 174 VKI 176
           + +
Sbjct: 403 LDV 405