Pairwise Alignments

Query, 182 a.a., site-specific integrase from Methanococcus maripaludis S2

Subject, 306 a.a., Tyrosine recombinase XerC from Alteromonas macleodii MIT1002

 Score = 40.4 bits (93), Expect = 3e-08
 Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 31  FKMLYGMALRVSELLTIEVKNINLNEGVCKLLDTKTENFQICV-------IPEWLN-EDI 82
           F++LYG  LR+SEL  + + +  L +G  K++   ++   + +       +  WL     
Sbjct: 148 FELLYGCGLRLSELTGLNLADC-LKDGTVKVMGKGSKQRILPLGRHAQKALNAWLKVRPA 206

Query: 83  FGHIVDNNLKDDDRLFKFKNRTYAWELVKKYTKDAKIHKEFSTHTFRRSRALHLLNDGVP 142
           +    ++ +    R  +  NR  A  L  K   +  + ++ S H  R S A H+L     
Sbjct: 207 YASPYESAVFVSKRKTRISNRQVANRL-DKMASEQSLSQKVSPHKLRHSFATHVLESSGD 265

Query: 143 LEKVSKYLRHKSINTTMHY 161
           L  V + L H +++TT  Y
Sbjct: 266 LRAVQELLGHANLSTTQVY 284