Pairwise Alignments

Query, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 261 a.a., ABC transporter for L-Arginine, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score = 93.6 bits (231), Expect = 4e-24
 Identities = 65/254 (25%), Positives = 127/254 (50%), Gaps = 22/254 (8%)

Query: 12  LILAISACISLPSEQITIKTGTLSVGVFKHAPP-AVYGQNGELIGFEVELVSEIAKRMNL 70
           L+L  +  +S+ S Q   +   L +G+    PP A    +G ++GF+ ++ + + + M +
Sbjct: 4   LVLLGALALSVLSMQAFAEGKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCEEMKV 63

Query: 71  NVEFKEYMFSNLLNAVANNEIDCAISDISISPEREKIVSFTRAYSHTELVVLVRKESGIR 130
              + E  F  L+ A+   +ID  +S +SI+ +R+K V FT  Y  T   +++++ + + 
Sbjct: 64  KCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTNRYYLTPARLVLKEGTAVS 123

Query: 131 -TITDLNGKKIGVVDDTIHETKAKSLQKSMDFEIIEYETPIELYNDLNNGKIDATISE-- 187
            ++ +L GKKIGV   +IH+  AK +       I+ Y +  E+Y D+  G++D T+++  
Sbjct: 124 DSLDELKGKKIGVQRGSIHDRFAKEVLAPKGATIVPYSSQNEIYLDVEAGRLDGTVADAT 183

Query: 188 ------MDN-------FKVSSYMDQLELIDTLEILYSGIAVNKNNKELLHEMDRVLLELE 234
                 +D        F   ++ D     D +     GIAV K +KE L  ++  +  + 
Sbjct: 184 LLQEGFLDTPAGKGYAFTGPAFTDAKYFGDGI-----GIAVRKGDKENLDRINAAIAAIR 238

Query: 235 TEGYIEELKQKWSN 248
             G  +E+++K+ N
Sbjct: 239 ANGKYKEIEKKYFN 252