Pairwise Alignments

Query, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 83.2 bits (204), Expect = 5e-21
 Identities = 58/246 (23%), Positives = 116/246 (47%), Gaps = 10/246 (4%)

Query: 9   AIVLILAISACISLPSEQITIKTGTLSVGVF-KHAPPAVYGQNGELIGFEVELVSEIAKR 67
           A++ + A++ C++  S  +  +   L  GV   +AP      +G L+GF+++L + I   
Sbjct: 4   ALLTLSALALCMAAGST-LAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAE 62

Query: 68  MNLNVEFKEYMFSNLLNAVANNEIDCAISDISISPEREKIVSFTRAYSHTELVVLVRKES 127
           + +  ++ E  F  ++  +  N+ D  IS ++++P REK + F+         ++ +K +
Sbjct: 63  LKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPVREKAIDFSSELFSGPTSLVFKKGA 122

Query: 128 GIRTITDLNGKKIGVVDDTIHETKAKSLQKSMDFEIIEYETPIELYNDLNNGKIDATISE 187
           G  T   L GK +G    TI E  AK++          Y    ++Y DL +G++DA++ +
Sbjct: 123 GYSTPESLKGKSVGYEQGTIQEAYAKAVLDKAGVTTKAYANQDQVYADLTSGRLDASVQD 182

Query: 188 MDNFKV--------SSYMDQLELIDTLEILYSGIAVNKNNKELLHEMDRVLLELETEGYI 239
           M   ++        + Y     + D L    + I + K N EL   +D+ +  L  +G  
Sbjct: 183 MLQAELGFLKSPAGAGYEVSAAIDDPLLPSKTAIGIKKGNTELKTLLDKGIKALHDDGTY 242

Query: 240 EELKQK 245
             +++K
Sbjct: 243 ATIQKK 248