Pairwise Alignments

Query, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 250 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 58/207 (28%), Positives = 115/207 (55%), Gaps = 5/207 (2%)

Query: 43  PPAVYGQNGELIGFEVELVSEIAKRMNLNVEFKEYMFSNLLNAVANNEIDCAISDISISP 102
           PP  + +NG+  GF+VELV  I K +   +E+ +  F  L+  + +   D A+S I I+ 
Sbjct: 40  PPMEFVENGKRTGFDVELVEAIGKTLGRKIEWIDIDFKGLVPGLISKRFDMAVSGIYITD 99

Query: 103 EREKIVSFTRAYSHTELVVLVRK-ESGIRTITDLNGKKIGVVDDTIHETKAKSLQKSMDF 161
           ER+K+V FT  Y    LVV+V+   + I+T  D+NGKK+ V   T  ++ + + +K    
Sbjct: 100 ERKKVVDFTVPYYAGGLVVMVKDGNTAIKTPADINGKKVSVQVGT--KSVSYTKEKFPQV 157

Query: 162 EIIEYETPIELYNDLNNGKIDATIS-EMDNFKVSSYMDQLELI-DTLEILYSGIAVNKNN 219
           +++E E   E++N ++ G+ DA ++ +   ++       L+++ + +     G+A+ K+ 
Sbjct: 158 QLMEVEKNQEMFNLVDIGRADAAVTGKPAAYQYVRTRGGLKVLPEQITTEEYGMAIRKDT 217

Query: 220 KELLHEMDRVLLELETEGYIEELKQKW 246
            EL   ++  + +L+ +G  +++ +KW
Sbjct: 218 PELTKAVNGAIEKLKADGTYDQIVKKW 244