Pairwise Alignments

Query, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 254 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  153 bits (386), Expect = 4e-42
 Identities = 89/247 (36%), Positives = 141/247 (57%), Gaps = 5/247 (2%)

Query: 4   ICFLMAIVLILAISACIS-LPSEQITIKTGTLSVGVFKHAPPAVYGQNGELIGFEVELVS 62
           +  + +I+++ + S C S    E  T+  G L+VG+    PP  Y ++GEL GF+++L+ 
Sbjct: 7   LVIISSILILTSFSGCTSSYGKEYNTVNPGVLTVGITPEMPPQQYYEDGELKGFDIDLMK 66

Query: 63  EIAKRMNLNVEFKEYMFSNLLNAVANNEIDCAISDISISPEREKIVSFTRAYSHTELVVL 122
           EIA  M L  EFK Y +     A+ N EIDC +  ++ISPER++ + F+RAY  T +VV 
Sbjct: 67  EIANNMGLKPEFKIYEYGGAHEALLNGEIDC-LPSMTISPERKEDMDFSRAYIQTYVVVA 125

Query: 123 VRKESGIRTITDLNGKKIGVVDDTIHETKAKSLQKSMDFEIIEYETPIELYNDLNNGKID 182
           V + S  R + DLNGK I VV +T  E  AK    S++  I  Y++   L +D+ +G ID
Sbjct: 126 VFENSPYRELKDLNGKNIAVVTNTYTEDWAKEYLGSLNANIKSYDSVEGLVSDVYSGNID 185

Query: 183 ATIS---EMDNFKVSSYMDQLELIDTLEILYSGIAVNKNNKELLHEMDRVLLELETEGYI 239
           A ++   ++D +   +  +   + + + I Y  IAV K+N  L +E++ VL EL+    +
Sbjct: 186 AVVTDQIQLDYYSKQNNFESRLIFEKMTIEYWAIAVKKDNHNLQNEINDVLFELDENKAL 245

Query: 240 EELKQKW 246
            ELK KW
Sbjct: 246 YELKNKW 252