Pairwise Alignments

Query, 248 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 243 a.a., arginine transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 60/223 (26%), Positives = 111/223 (49%), Gaps = 15/223 (6%)

Query: 34  LSVGVFKHAPP-AVYGQNGELIGFEVELVSEIAKRMNLNVEFKEYMFSNLLNAVANNEID 92
           ++ GV    PP    G N E++GF+++L   + K+M     F  + F +L+ ++   + D
Sbjct: 23  INFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYD 82

Query: 93  CAISDISISPEREKIVSFTRAYSHTELVVLVRKESGIRTITDLNGKKIGVVDDTIHETKA 152
             IS + I+PER K VSFT  Y     VV+ +K++  +T  DL GK+IG+ + T H+   
Sbjct: 83  AVISGMDITPERSKQVSFTTPYYENSAVVIAKKDT-YKTFADLKGKRIGMENGTTHQKYI 141

Query: 153 KSLQKSMDFEIIEYETPIELYNDLNNGKIDATISEMDNFKVSSYMDQLELIDTLEILYS- 211
           +   +  + + + Y++    + DL NG+ID      D   V+ ++     +       + 
Sbjct: 142 Q--DQHPEVKTVSYDSYQNAFIDLKNGRIDGVFG--DTAVVNEWLKTNPQLGVATEKVTD 197

Query: 212 --------GIAVNKNNKELLHEMDRVLLELETEGYIEELKQKW 246
                   GIAV  +NK LL +++  L  ++ +G  +++  +W
Sbjct: 198 PQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKISDQW 240