Pairwise Alignments

Query, 337 a.a., site-2 protease family protein from Methanococcus maripaludis S2

Subject, 373 a.a., Putative zinc metalloprotease Rip3 from Xanthobacter sp. DMC5

 Score =  145 bits (365), Expect = 2e-39
 Identities = 108/359 (30%), Positives = 180/359 (50%), Gaps = 34/359 (9%)

Query: 3   SFKIARVMGIPIELHITFILLLIVVFYFW--------GIEGLILYMFLFTSVVLHELGHS 54
           S  I R+    I +H+TF+L L+ ++  +          EG++    LF  V+LHELGH 
Sbjct: 4   SLTIGRLGETAIRIHVTFLLFLVWIWAAYYRSGGSQAAWEGVLFVALLFFCVLLHELGHV 63

Query: 55  YVAKKYGVKIEKILLLPIGGMAMMSEISKE--GEFKIAIAGPLVSLALGTVLLGISTVT- 111
           + A++YGVK   I L P GG+A +  I ++   E  +AIAGP V++ +   LL + + T 
Sbjct: 64  FAARRYGVKTPDITLWPFGGIANLERIPEKPSQELVVAIAGPAVNVVIAVALLVVLSFTL 123

Query: 112 --------DYTLAEYP---LFQTVGGLNILLGIFNLLPAFPMDGGRVFRALLSKLTSMSY 160
                   D    E P   +   + G NI L +FNL+PAFPMDGGRV RALL+   +M +
Sbjct: 124 AGGDLKAEDLAKIEDPRTSMLVKLAGANIFLVLFNLIPAFPMDGGRVLRALLA--MNMGF 181

Query: 161 IKATKLASTVGQYFALALLIFGLINFNVILVLIAIFIYFGASQEYRALVADTLFQDVPAK 220
            +AT +A+ +GQ  A+ L + G+   N +L++I +F++  AS E   +      +     
Sbjct: 182 ARATAVAAFIGQGLAIGLGLLGIFT-NPMLMIIGVFVFLAASGEAGQVQLREASRGHIVA 240

Query: 221 DIMSKNIVYVNSEDTVDDVLNLMLENRFLGYPVLEN-GNIIGTIT---MNEISSTTAKTA 276
           D M  +   +  + TVDD    ++ +    +PV++  G++ G +T   M         T 
Sbjct: 241 DAMITHFETLGPQSTVDDAAEALIRSTQKEFPVVDGAGHLRGVLTRDAMIRALKEQGPTT 300

Query: 277 KVKEIMSPPV-MVSPEAALNELIK--GMANTDRVYVVD--NGNILGIISKTDIVRTLSI 330
            V E+M   +  V   + L+  +K    A    V V+D   G ++G+++  ++   + I
Sbjct: 301 PVIEVMQHDIPTVEARSKLDAALKLITSAQVPAVGVLDAPGGRLVGLLTPENVGELMMI 359