Pairwise Alignments

Query, 337 a.a., site-2 protease family protein from Methanococcus maripaludis S2

Subject, 144 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 42.4 bits (98), Expect = 7e-09
 Identities = 18/64 (28%), Positives = 37/64 (57%)

Query: 216 DVPAKDIMSKNIVYVNSEDTVDDVLNLMLENRFLGYPVLENGNIIGTITMNEISSTTAKT 275
           D PA ++M++ ++     DTV D++ +M E R    P++E G +IG I++ ++       
Sbjct: 69  DGPAANLMTRELITAAPTDTVADMMAVMTERRIRHVPIVEAGRVIGVISIGDVVKARIDD 128

Query: 276 AKVK 279
           A+++
Sbjct: 129 AELE 132



 Score = 25.8 bits (55), Expect = 7e-04
 Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 10/110 (9%)

Query: 227 IVYVNSEDTVDDVLNLMLENRFLGYPVLE-NGNIIGTITMNEISSTTAKTAKVKEIMSPP 285
           IV    +D+V  V  L+ E+R     V++ +G  +G ++  ++    A+           
Sbjct: 14  IVSAAPDDSVAAVTRLLTEHRIGAVLVIDGDGQPVGILSERDVVRAIARNGAAALDGPAA 73

Query: 286 VMVSPE---AALNELIKGM--ANTDR----VYVVDNGNILGIISKTDIVR 326
            +++ E   AA  + +  M    T+R    V +V+ G ++G+IS  D+V+
Sbjct: 74  NLMTRELITAAPTDTVADMMAVMTERRIRHVPIVEAGRVIGVISIGDVVK 123



 Score = 22.3 bits (46), Expect = 0.007
 Identities = 10/24 (41%), Positives = 18/24 (75%), Gaps = 1/24 (4%)

Query: 307 VYVVD-NGNILGIISKTDIVRTLS 329
           V V+D +G  +GI+S+ D+VR ++
Sbjct: 38  VLVIDGDGQPVGILSERDVVRAIA 61